BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033225
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             76   3e-12
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   75   4e-12
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    69   3e-10
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    69   3e-10
dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]         69   4e-10

>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 32/60 (53%), Positives = 46/60 (76%)
 Frame = +1

Query: 19  RGKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFANDLIAF 198
           +GKRG+RQGDP+SPYLF++ ME+ S  + Q  + G  QLH +C +P++THL FA+DL+ F
Sbjct: 15  KGKRGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTHLIFADDLVIF 74


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/64 (50%), Positives = 47/64 (73%)
 Frame = +1

Query: 19  RGKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFANDLIAF 198
           +G+RG+RQGDP+SPYLF++ ME+ S ++ +   E    LH +C  PVITHL+FA+D++ F
Sbjct: 98  KGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIF 157

Query: 199 MHGE 210
             GE
Sbjct: 158 TSGE 161


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = +1

Query: 22  GKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFANDLIAFM 201
           GK+GIRQGDPMS +LFVLVM++ +  +     EG   LH +C  P+ITHLSFA+D++ F 
Sbjct: 193 GKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFC 252

Query: 202 HG 207
            G
Sbjct: 253 DG 254


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = +1

Query: 22  GKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFANDLIAFM 201
           GK+GIRQGDPMS +LFVLVM++ +  +     EG   LH +C  P+ITHLSFA+D++ F 
Sbjct: 193 GKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFC 252

Query: 202 HG 207
            G
Sbjct: 253 DG 254


>dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]
          Length = 422

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/59 (50%), Positives = 44/59 (74%)
 Frame = +1

Query: 22  GKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFANDLIAF 198
           G++G+RQGDP+SPYLF++VM++ S+L+ Q   EG  +LH  C  P +THL FA+ L+ F
Sbjct: 42  GQKGLRQGDPISPYLFIIVMKVLSNLLSQATYEGKFRLHPLCDSPRLTHLLFADALLIF 100