BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033216
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
emb|CBI28050.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus...    64   1e-08
ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1, chloropl...    62   5e-08
ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07

>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = +1

Query: 160 GGKDGISTQEDCKILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTS 306
           G  D  + +ED +I VSED KKYAL RGFEIYEKMCLE +P+NEA+LTS
Sbjct: 287 GVDDSTNKKEDNEIRVSEDFKKYALRRGFEIYEKMCLEKVPMNEATLTS 335


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = +1

Query: 160 GGKDGISTQEDCKILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTS 306
           G  D  + +ED +I VSED KKYAL RGFEIYEKMCLE +P+NEA+LTS
Sbjct: 222 GVDDSTNKKEDNEIRVSEDFKKYALRRGFEIYEKMCLEKVPMNEATLTS 270


>ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546737|gb|EEF48235.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 745

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 199 ILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTS 306
           ILVSED+KKYAL RGFEIYEKMC++ IP+NEA+LT+
Sbjct: 230 ILVSEDIKKYALERGFEIYEKMCMDKIPMNEATLTA 265


>ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449506617|ref|XP_004162799.1| PREDICTED:
           proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 633

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = +1

Query: 199 ILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTS 306
           ILV ED KKYAL  GFEIYEKMC ENIP+NEA+LTS
Sbjct: 193 ILVDEDFKKYALETGFEIYEKMCAENIPMNEATLTS 228


>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 37/43 (86%)
 Frame = +1

Query: 178 STQEDCKILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTS 306
           ST++D  +LVSEDVK+YAL RGFE+Y+ MCL+ + +NEA+LT+
Sbjct: 201 STEKDEILLVSEDVKRYALQRGFEVYQNMCLDKVQMNEAALTA 243