BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033213
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320768.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-28
ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   117   9e-28
ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arab...   109   3e-27
ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protei...   109   7e-27
gb|AAF76480.1|AC020622_14 Identical to dimethyladenosine transfe...   109   7e-27

>ref|XP_002320768.1| predicted protein [Populus trichocarpa] gi|222861541|gb|EEE99083.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  112 bits (279), Expect(2) = 5e-28
 Identities = 54/75 (72%), Positives = 65/75 (86%)
 Frame = +2

Query: 2   KSLGQHYMLNTAINDKLVETAEVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMA 181
           KSLGQHYMLN  IN++LV +A V +GD++LEIGPGTGSLTNVL++AGATV+AIEKD HMA
Sbjct: 44  KSLGQHYMLNDEINEQLVASANVEEGDLILEIGPGTGSLTNVLIDAGATVLAIEKDAHMA 103

Query: 182 ALVKERFASLNASRV 226
           ALV+ERFA  N  +V
Sbjct: 104 ALVRERFADTNRFKV 118



 Score = 37.4 bits (85), Expect(2) = 5e-28
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 214 RFSGLQEDFTKCNIRCHMMSSMES 285
           RF  LQEDF KC+IR HM+S +ES
Sbjct: 115 RFKVLQEDFIKCHIRSHMLSMLES 138


>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score =  117 bits (294), Expect(2) = 9e-28
 Identities = 56/75 (74%), Positives = 69/75 (92%)
 Frame = +2

Query: 2   KSLGQHYMLNTAINDKLVETAEVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMA 181
           KSLGQHYMLN++IN++L +TA++RDGDV+LEIGPGTGSLTNVLL+AGATV+AIEKD HMA
Sbjct: 65  KSLGQHYMLNSSINEQLADTADIRDGDVILEIGPGTGSLTNVLLDAGATVLAIEKDAHMA 124

Query: 182 ALVKERFASLNASRV 226
           ALV+ERFA  +  +V
Sbjct: 125 ALVRERFAVTDRLKV 139



 Score = 30.8 bits (68), Expect(2) = 9e-28
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 211 ERFSGLQEDFTKCNIRCHMMSSMES 285
           +R   LQEDF KC+I  H+ S +ES
Sbjct: 135 DRLKVLQEDFMKCHIHPHLFSLLES 159


>ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
           lyrata] gi|297335191|gb|EFH65608.1| hypothetical protein
           ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  109 bits (273), Expect(2) = 3e-27
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   KSLGQHYMLNTAINDKLVETAEVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMA 181
           KSLGQHYMLN+ IND+L   A+V++GD VLEIGPGTGSLTNVL+N GATV+AIEKDPHM 
Sbjct: 72  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMV 131

Query: 182 ALVKERFASLNASRV 226
            LV ERFA  +  +V
Sbjct: 132 DLVSERFAGSDKFKV 146



 Score = 37.0 bits (84), Expect(2) = 3e-27
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +1

Query: 211 ERFSGLQEDFTKCNIRCHMMSSMES 285
           ++F  LQEDF KC+IR HM+S +ES
Sbjct: 142 DKFKVLQEDFVKCHIRSHMLSILES 166


>ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana] gi|3005590|gb|AAC09322.1| dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|26449914|dbj|BAC42078.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|28827572|gb|AAO50630.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|332189223|gb|AEE27344.1| Ribosomal RNA adenine
           dimethylase family protein [Arabidopsis thaliana]
          Length = 343

 Score =  109 bits (273), Expect(2) = 7e-27
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   KSLGQHYMLNTAINDKLVETAEVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMA 181
           KSLGQHYMLN+ IND+L   A+V++GD VLEIGPGTGSLTNVL+N GATV+AIEKDPHM 
Sbjct: 73  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMV 132

Query: 182 ALVKERFASLNASRV 226
            LV ERFA  +  +V
Sbjct: 133 DLVSERFAGSDKFKV 147



 Score = 35.8 bits (81), Expect(2) = 7e-27
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +1

Query: 211 ERFSGLQEDFTKCNIRCHMMSSMES 285
           ++F  LQEDF KC+IR HM+S +E+
Sbjct: 143 DKFKVLQEDFVKCHIRSHMLSILET 167


>gb|AAF76480.1|AC020622_14 Identical to dimethyladenosine transferase (PFC1) from Arabidopsis
           thaliana gb|AF051326 and contains a Ribosomal RNA
           Adenine Dimethylases PF|00398 domain. This gene may be
           cut off, partial [Arabidopsis thaliana]
          Length = 239

 Score =  109 bits (273), Expect(2) = 7e-27
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   KSLGQHYMLNTAINDKLVETAEVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMA 181
           KSLGQHYMLN+ IND+L   A+V++GD VLEIGPGTGSLTNVL+N GATV+AIEKDPHM 
Sbjct: 73  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMV 132

Query: 182 ALVKERFASLNASRV 226
            LV ERFA  +  +V
Sbjct: 133 DLVSERFAGSDKFKV 147



 Score = 35.8 bits (81), Expect(2) = 7e-27
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +1

Query: 211 ERFSGLQEDFTKCNIRCHMMSSMES 285
           ++F  LQEDF KC+IR HM+S +E+
Sbjct: 143 DKFKVLQEDFVKCHIRSHMLSILET 167