BLASTX nr result

ID: Coptis24_contig00033212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033212
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    43   2e-06

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = -1

Query: 432 SLWISWTWTWTEHIKEKFFWTMQVPRDCSWTWRCILKHRKHANNLLKYSI 283
           S+W   TW  +  ++ + FWT++ P++CSW W  ILK R  A   +KY I
Sbjct: 188 SIWS--TWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYII 235



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
 Frame = -3

Query: 280 TLLWHDPWCLEGPLLLS--QEVTDHLPLPLDVKVSSQITNGEWN----QLVHTFPEGEVK 119
           T LW D W    PL  S  +       +  + KV+  I N EW     Q +   P  E  
Sbjct: 241 TSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEA- 299

Query: 118 SRILATEINVHLPE-DRVIWLSSPSGVFTSKAAYNDLRK 5
              + +  N  + + D ++WL SP+  F+ K A+  LR+
Sbjct: 300 ---IPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRR 335


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