BLASTX nr result
ID: Coptis24_contig00033212
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033212 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 43 2e-06 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 43.1 bits (100), Expect(2) = 2e-06 Identities = 20/50 (40%), Positives = 30/50 (60%) Frame = -1 Query: 432 SLWISWTWTWTEHIKEKFFWTMQVPRDCSWTWRCILKHRKHANNLLKYSI 283 S+W TW + ++ + FWT++ P++CSW W ILK R A +KY I Sbjct: 188 SIWS--TWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYII 235 Score = 33.5 bits (75), Expect(2) = 2e-06 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Frame = -3 Query: 280 TLLWHDPWCLEGPLLLS--QEVTDHLPLPLDVKVSSQITNGEWN----QLVHTFPEGEVK 119 T LW D W PL S + + + KV+ I N EW Q + P E Sbjct: 241 TSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEA- 299 Query: 118 SRILATEINVHLPE-DRVIWLSSPSGVFTSKAAYNDLRK 5 + + N + + D ++WL SP+ F+ K A+ LR+ Sbjct: 300 ---IPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRR 335