BLASTX nr result
ID: Coptis24_contig00033211
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033211 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-10 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 68 7e-10 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 68 9e-10 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 68 9e-10 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 71.2 bits (173), Expect = 8e-11 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Frame = -3 Query: 399 IWLSSPSGVFTSKAAYNDLRKKRRSPNWCKMVWGKLVLSKHSFNGWQLFSGSLPTRDRLR 220 IWL SP+ F+ K A+ LR+ R+ W +VW K + +HSF W + L T+D+L Sbjct: 848 IWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLH 907 Query: 219 HKKVLNSSQCCFWTCERENSKHIFFGCHFSSNVWARVKQALGLGSSVKSSNQ--EWCCI- 49 + ++C E+ H+FF C ++ +W V + K ++ W + Sbjct: 908 RFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVS 967 Query: 48 ------INHCRKQSPKAEVY 7 IN RK S A VY Sbjct: 968 WHGKSFINFSRKLSFAATVY 987 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 70.5 bits (171), Expect = 1e-10 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Frame = -3 Query: 399 IWLSSPSGVFTSKAAYNDLRKKRRSPNWCKMVWGKLVLSKHSFNGWQLFSGSLPTRDRLR 220 +WL SP+ F+ K A+ LR+ R W +VW K + +HSF W + L T+D+L Sbjct: 133 VWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLH 192 Query: 219 HKKVLNSSQCCFWTCERENSKHIFFGCHFSSNVWARVKQALGLGSSVKSSNQ--EWCCI- 49 + ++C E+ H+FF C ++ +W V + K ++ W + Sbjct: 193 RFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVS 252 Query: 48 ------INHCRKQSPKAEVY 7 +N RK S A VY Sbjct: 253 WHGKSFVNFSRKLSFAATVY 272 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 68.2 bits (165), Expect = 7e-10 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Frame = -3 Query: 399 IWLSSPSGVFTSKAAYNDLRKKRRSPNWCKMVWGKLVLSKHSFNGWQLFSGSLPTRDRLR 220 +WL SP+ F K A+ LR+ R+ W +VW K + +HSF W L T+D+L Sbjct: 1188 VWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLY 1247 Query: 219 HKKVLNSSQCCFWTCERENSKHIFFGCHFSSNVWARVKQALGLGSSVKSSNQ--EWCCI- 49 + ++C E+ H+FF C ++ +W V + K ++ W + Sbjct: 1248 RFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVS 1307 Query: 48 ------INHCRKQSPKAEVY 7 +N RK S A VY Sbjct: 1308 WHGKSFVNFSRKLSFAATVY 1327 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 67.8 bits (164), Expect = 9e-10 Identities = 29/94 (30%), Positives = 48/94 (51%) Frame = -3 Query: 399 IWLSSPSGVFTSKAAYNDLRKKRRSPNWCKMVWGKLVLSKHSFNGWQLFSGSLPTRDRLR 220 +WL SP+ F+ K A+ LR+ R+ W +VW K + +HSF W L T+D+L Sbjct: 315 VWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLH 374 Query: 219 HKKVLNSSQCCFWTCERENSKHIFFGCHFSSNVW 118 + ++C E+ H+FF C ++ +W Sbjct: 375 RFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 408 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 67.8 bits (164), Expect = 9e-10 Identities = 32/88 (36%), Positives = 46/88 (52%) Frame = -3 Query: 372 FTSKAAYNDLRKKRRSPNWCKMVWGKLVLSKHSFNGWQLFSGSLPTRDRLRHKKVLNSSQ 193 F++ + LR +R W K VW K + KH+FN W LPTR RL +++S++ Sbjct: 892 FSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAE 951 Query: 192 CCFWTCERENSKHIFFGCHFSSNVWARV 109 CC + + E H+ C FSS VW V Sbjct: 952 CCLCSFDTETRDHLLLLCDFSSQVWRMV 979