BLASTX nr result

ID: Coptis24_contig00033200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033200
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275108.1| PREDICTED: patatin group A-3-like [Vitis vin...   150   8e-35
ref|XP_003536356.1| PREDICTED: patatin group A-3-like [Glycine max]   149   2e-34
ref|XP_004142417.1| PREDICTED: patatin group A-3-like isoform 2 ...   143   1e-32
ref|XP_004142416.1| PREDICTED: patatin group A-3-like isoform 1 ...   143   1e-32
ref|XP_003556231.1| PREDICTED: patatin group A-3-like [Glycine max]   142   3e-32

>ref|XP_002275108.1| PREDICTED: patatin group A-3-like [Vitis vinifera]
          Length = 458

 Score =  150 bits (380), Expect = 8e-35
 Identities = 81/102 (79%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = +1

Query: 70  LQCN-RSEMQEPSIDTDKLSYEIFSILESKFLFGYDDQNKLWIPKQISPAHETIAPTAST 246
           + CN +SEMQEPSIDTDKLSYEIFSILESKFLFGYDDQ KLWIPKQI    E   P    
Sbjct: 1   MACNLQSEMQEPSIDTDKLSYEIFSILESKFLFGYDDQ-KLWIPKQIETKSEVSTPPPP- 58

Query: 247 NDNCVSSIKNQRGKICVLSIDGGGMRGILSGKALAYLEQALK 372
            DN VS+IKNQRGKIC+LSIDGGGMRGILSG+ALAYLEQALK
Sbjct: 59  -DNGVSAIKNQRGKICILSIDGGGMRGILSGRALAYLEQALK 99


>ref|XP_003536356.1| PREDICTED: patatin group A-3-like [Glycine max]
          Length = 464

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/99 (74%), Positives = 84/99 (84%)
 Frame = +1

Query: 79  NRSEMQEPSIDTDKLSYEIFSILESKFLFGYDDQNKLWIPKQISPAHETIAPTASTNDNC 258
           N  +MQEPSI+TDKLSYEIFSILESKFLFGYDD  KLW PKQI P  E+  P A+   +C
Sbjct: 5   NELDMQEPSIETDKLSYEIFSILESKFLFGYDDP-KLWFPKQIPPKPESQTPAATAAVDC 63

Query: 259 VSSIKNQRGKICVLSIDGGGMRGILSGKALAYLEQALKK 375
           VS++KNQRGKIC+L+IDGGGMRGIL+GKALAYLE ALKK
Sbjct: 64  VSAVKNQRGKICILAIDGGGMRGILAGKALAYLEAALKK 102


>ref|XP_004142417.1| PREDICTED: patatin group A-3-like isoform 2 [Cucumis sativus]
           gi|449531073|ref|XP_004172512.1| PREDICTED: patatin
           group A-3-like [Cucumis sativus]
          Length = 417

 Score =  143 bits (361), Expect = 1e-32
 Identities = 78/104 (75%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
 Frame = +1

Query: 79  NRSEMQEPSIDTDKLSYEIFSILESKFLFGYDDQNKLWIPKQISPAHETIAPTASTND-- 252
           N  EMQEPSIDTDKLSYEIFSILE+KFLFGYDDQ KLWIPKQISP  ++I       +  
Sbjct: 4   NLLEMQEPSIDTDKLSYEIFSILETKFLFGYDDQ-KLWIPKQISPLIDSIPQLHPRPELQ 62

Query: 253 ----NCVSSIKNQRGKICVLSIDGGGMRGILSGKALAYLEQALK 372
               N VS+IKNQRGKICVLSID GGMRGILSGKAL+YLEQALK
Sbjct: 63  PESINAVSAIKNQRGKICVLSIDSGGMRGILSGKALSYLEQALK 106


>ref|XP_004142416.1| PREDICTED: patatin group A-3-like isoform 1 [Cucumis sativus]
          Length = 465

 Score =  143 bits (361), Expect = 1e-32
 Identities = 78/104 (75%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
 Frame = +1

Query: 79  NRSEMQEPSIDTDKLSYEIFSILESKFLFGYDDQNKLWIPKQISPAHETIAPTASTND-- 252
           N  EMQEPSIDTDKLSYEIFSILE+KFLFGYDDQ KLWIPKQISP  ++I       +  
Sbjct: 4   NLLEMQEPSIDTDKLSYEIFSILETKFLFGYDDQ-KLWIPKQISPLIDSIPQLHPRPELQ 62

Query: 253 ----NCVSSIKNQRGKICVLSIDGGGMRGILSGKALAYLEQALK 372
               N VS+IKNQRGKICVLSID GGMRGILSGKAL+YLEQALK
Sbjct: 63  PESINAVSAIKNQRGKICVLSIDSGGMRGILSGKALSYLEQALK 106


>ref|XP_003556231.1| PREDICTED: patatin group A-3-like [Glycine max]
          Length = 454

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = +1

Query: 91  MQEPSIDTDKLSYEIFSILESKFLFGYDDQNKLWIPKQISPAHETIAPTASTNDNCVSSI 270
           MQEPSI+TDKLSYEIFSILESKFLFGYDD  KLW PKQI    E+  P A+   N VSS+
Sbjct: 1   MQEPSIETDKLSYEIFSILESKFLFGYDDP-KLWFPKQIPTKPESQTPAATAAVNGVSSV 59

Query: 271 KNQRGKICVLSIDGGGMRGILSGKALAYLEQALKK 375
           KNQRGKIC+L+IDGGGMRGIL+GKALAYLE ALKK
Sbjct: 60  KNQRGKICILAIDGGGMRGILAGKALAYLEAALKK 94


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