BLASTX nr result

ID: Coptis24_contig00033197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033197
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    79   9e-13
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    79   9e-13
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12

>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
 Frame = +2

Query: 191 GESLLGMSYSKEVNLSEPQIVNG-VEIYPK-DILKKGEDEWKEYLVGFFMESRIDYPVVK 364
           G   LG+S  + ++ + P + +G V++ P  D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 365 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 541
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 542 QKKQAKSIPIWVNLYDI 592
            K     +P+WV LY++
Sbjct: 233 LKDDFARVPVWVRLYNV 249


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = +2

Query: 191 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 364
           G   LG+S  + ++ + P   +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 365 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 541
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 542 QKKQAKSIPIWVNLYDI 592
            K     +P+WV LY++
Sbjct: 233 LKDDLARVPVWVRLYNV 249


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
 Frame = +2

Query: 191 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 364
           G   LG+S  + ++ + P + +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 365 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 541
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 542 QKKQAKSIPIWVNLYDI 592
            K    ++P+WV LY++
Sbjct: 233 LKDDLATVPVWVWLYNV 249


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = +2

Query: 191 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 364
           G   LG+S  + ++ + P + +G      P D+ + G + WK  LVG FM  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVN 172

Query: 365 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 541
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A    V+K W   +  
Sbjct: 173 SIAKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQF 232

Query: 542 QKKQAKSIPIWVNLYDI 592
            K     +P+WV LY++
Sbjct: 233 LKDDLARVPVWVWLYNV 249


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
 Frame = +2

Query: 191 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 364
           G   LG+S  + ++ + P   +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 365 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 541
               R W + G  ++ S+D  +  F F   +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 542 QKKQAKSIPIWVNLYDI 592
            K     +P+WV LY++
Sbjct: 233 LKDDLARVPVWVRLYNV 249



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
 Frame = +2

Query: 191  GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 364
            G   LG+S  + ++ + P   +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 906  GSKTLGISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 965

Query: 365  QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 541
                R W + G  ++ S+D  +  F F   +    VLE+ P  +A R  V+K W   +  
Sbjct: 966  SIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQF 1025

Query: 542  QKKQAKSIPIWVNLYDI 592
             K     +P+WV LY++
Sbjct: 1026 LKDDLARVPVWVRLYNV 1042


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