BLASTX nr result
ID: Coptis24_contig00033184
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033184 (391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu... 143 1e-32 ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec... 141 6e-32 emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera] 139 2e-31 emb|CBI30649.3| unnamed protein product [Vitis vinifera] 139 2e-31 ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti... 139 2e-31 >ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis] gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant, putative [Ricinus communis] Length = 843 Score = 143 bits (361), Expect = 1e-32 Identities = 72/130 (55%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Frame = -3 Query: 389 TYTASLTSMLTVQRLEPTI-DIATLNRSNSSVGCDGDGFVIKYAIDVLGFHPNNIINFAN 213 +YTA+LTSMLT+QRL+P + DI L R+N VGCDGD FV KY +VL F P NI N ++ Sbjct: 588 SYTANLTSMLTIQRLQPNVTDIEWLKRNNLPVGCDGDSFVRKYLENVLQFRPENIKNVSS 647 Query: 212 EFDYPDAFKSGKIKAALLELPYERVFISRYGKEYQVTDGAHRFGGLGFAFPKGSPMVKHF 33 E+ YP F+ I AA LELPY++VF++ Y K Y HRFGGLGFAF KGSP+ Sbjct: 648 EYSYPGEFQKKTIYAAFLELPYQKVFMNHYCKNYIANTPTHRFGGLGFAFQKGSPIAADV 707 Query: 32 SEAFLNMSED 3 S+A L +SED Sbjct: 708 SKAILKLSED 717 >ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222848057|gb|EEE85604.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 931 Score = 141 bits (355), Expect = 6e-32 Identities = 72/130 (55%), Positives = 88/130 (67%), Gaps = 1/130 (0%) Frame = -3 Query: 389 TYTASLTSMLTVQRLEPTI-DIATLNRSNSSVGCDGDGFVIKYAIDVLGFHPNNIINFAN 213 +YTASL SMLTV+RL+P + DI L R++ VGCDGD FV Y +VLGF NI N ++ Sbjct: 647 SYTASLASMLTVRRLQPNVTDIEWLKRNSLKVGCDGDSFVRNYLQNVLGFKQENIKNVSS 706 Query: 212 EFDYPDAFKSGKIKAALLELPYERVFISRYGKEYQVTDGAHRFGGLGFAFPKGSPMVKHF 33 E+ Y F+S I AA LELPYE+VFI Y K Y T +RFGGLGF F KGSP+ Sbjct: 707 EYSYEGEFESATISAAFLELPYEKVFIGHYCKRYSATTPTYRFGGLGFVFQKGSPIAADV 766 Query: 32 SEAFLNMSED 3 S+A LN+SED Sbjct: 767 SKAILNLSED 776 >emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera] Length = 916 Score = 139 bits (351), Expect = 2e-31 Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Frame = -3 Query: 389 TYTASLTSMLTVQRLEPTI-DIATLNRSNSSVGCDGDGFVIKYAIDVLGFHPNNIINFAN 213 +YTASL+SMLTVQRLEP + DI L +VGCDGD FV KY DVL F +NI N ++ Sbjct: 658 SYTASLSSMLTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLXDVLDFKKDNIKNISS 717 Query: 212 EFDYPDAFKSGKIKAALLELPYERVFISRYGKEYQVTDGAHRFGGLGFAFPKGSPMVKHF 33 ++ YP+ F+ G I AA LELPYE+VF++RY K Y ++ RFGGLGF F KGSP+ Sbjct: 718 QYXYPNEFQKGTISAAFLELPYEKVFMNRYCKXYTASNPLSRFGGLGFVFQKGSPIAADV 777 Query: 32 SEAFLNMSE 6 S+A L +SE Sbjct: 778 SKAILTLSE 786 >emb|CBI30649.3| unnamed protein product [Vitis vinifera] Length = 924 Score = 139 bits (350), Expect = 2e-31 Identities = 71/129 (55%), Positives = 91/129 (70%), Gaps = 1/129 (0%) Frame = -3 Query: 389 TYTASLTSMLTVQRLEPTI-DIATLNRSNSSVGCDGDGFVIKYAIDVLGFHPNNIINFAN 213 +YTASL+SMLTVQRLEP + DI L +VGCDGD FV KY DVL F +NI N ++ Sbjct: 666 SYTASLSSMLTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLEDVLDFKKDNIKNISS 725 Query: 212 EFDYPDAFKSGKIKAALLELPYERVFISRYGKEYQVTDGAHRFGGLGFAFPKGSPMVKHF 33 ++ YP+ F+ G I AA LELPYE+VF++RY K+Y ++ RFGGLGF F KGSP+ Sbjct: 726 QYAYPNEFQKGTISAAFLELPYEKVFMNRYCKKYTASNPLSRFGGLGFVFQKGSPIAADV 785 Query: 32 SEAFLNMSE 6 S+A L +SE Sbjct: 786 SKAILTLSE 794 >ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera] Length = 916 Score = 139 bits (350), Expect = 2e-31 Identities = 71/129 (55%), Positives = 91/129 (70%), Gaps = 1/129 (0%) Frame = -3 Query: 389 TYTASLTSMLTVQRLEPTI-DIATLNRSNSSVGCDGDGFVIKYAIDVLGFHPNNIINFAN 213 +YTASL+SMLTVQRLEP + DI L +VGCDGD FV KY DVL F +NI N ++ Sbjct: 658 SYTASLSSMLTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLEDVLDFKKDNIKNISS 717 Query: 212 EFDYPDAFKSGKIKAALLELPYERVFISRYGKEYQVTDGAHRFGGLGFAFPKGSPMVKHF 33 ++ YP+ F+ G I AA LELPYE+VF++RY K+Y ++ RFGGLGF F KGSP+ Sbjct: 718 QYAYPNEFQKGTISAAFLELPYEKVFMNRYCKKYTASNPLSRFGGLGFVFQKGSPIAADV 777 Query: 32 SEAFLNMSE 6 S+A L +SE Sbjct: 778 SKAILTLSE 786