BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033170
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi...   396   e-108
emb|CBI39683.3| unnamed protein product [Vitis vinifera]              396   e-108
emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]   396   e-108
ref|XP_002323212.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containi...   364   1e-98

>ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
            [Vitis vinifera]
          Length = 603

 Score =  396 bits (1018), Expect = e-108
 Identities = 187/262 (71%), Positives = 221/262 (84%)
 Frame = -2

Query: 787  GVDTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARR 608
            G D FTLVSLLSSCAHVGAL  GVQMH+F  E   + N+FVGNALIDMY+KCG L  A  
Sbjct: 224  GFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALS 283

Query: 607  VFERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGL 428
            +F  M KRD+FTWNSMI+G GVHGRG+EAI+ F  ML+ G++PN ITFLGLLC CSHQGL
Sbjct: 284  IFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGL 343

Query: 427  VEEGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLL 248
            V+EG+ YF MMSS+F+L+PGIKHYGC+VD+FGRAG+L++AL  I+ SPS  DPVLWRTLL
Sbjct: 344  VKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLL 403

Query: 247  GSCKIHRNVGIGEVAMKKLVTLNGLGAGDCVLLAGIYSEAKDQQGASRMRKLIKNKGIKT 68
            GSCKIHRNV IGE+AM+ LV L  LGAGDCVLL+GIY+EAKD QG +RMRKLI+++GIKT
Sbjct: 404  GSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKT 463

Query: 67   TPGWSWIEIQNNVHKFVVDDKS 2
            TPGWSWIE+ + VH+FVVDDKS
Sbjct: 464  TPGWSWIEVGDQVHRFVVDDKS 485



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 51/184 (27%), Positives = 86/184 (46%)
 Frame = -2

Query: 781 DTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARRVF 602
           DT+T   LL +C          ++H F+   G+  +V +   LI  Y+  G ++ A +VF
Sbjct: 125 DTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVF 184

Query: 601 ERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGLVE 422
           E M  RD+ +WNSMI      G  EEA+ ++ QM +  +  +  T + LL +C+H G + 
Sbjct: 185 EEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALH 244

Query: 421 EGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLLGS 242
            G+        +  L   I     ++DM+ + G L  AL+     P   D   W +++  
Sbjct: 245 MGVQMHRFAGER-RLVENIFVGNALIDMYAKCGSLASALSIFNSMPK-RDVFTWNSMIVG 302

Query: 241 CKIH 230
             +H
Sbjct: 303 YGVH 306


>emb|CBI39683.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  396 bits (1018), Expect = e-108
 Identities = 187/262 (71%), Positives = 221/262 (84%)
 Frame = -2

Query: 787 GVDTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARR 608
           G D FTLVSLLSSCAHVGAL  GVQMH+F  E   + N+FVGNALIDMY+KCG L  A  
Sbjct: 206 GFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALS 265

Query: 607 VFERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGL 428
           +F  M KRD+FTWNSMI+G GVHGRG+EAI+ F  ML+ G++PN ITFLGLLC CSHQGL
Sbjct: 266 IFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGL 325

Query: 427 VEEGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLL 248
           V+EG+ YF MMSS+F+L+PGIKHYGC+VD+FGRAG+L++AL  I+ SPS  DPVLWRTLL
Sbjct: 326 VKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLL 385

Query: 247 GSCKIHRNVGIGEVAMKKLVTLNGLGAGDCVLLAGIYSEAKDQQGASRMRKLIKNKGIKT 68
           GSCKIHRNV IGE+AM+ LV L  LGAGDCVLL+GIY+EAKD QG +RMRKLI+++GIKT
Sbjct: 386 GSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKT 445

Query: 67  TPGWSWIEIQNNVHKFVVDDKS 2
           TPGWSWIE+ + VH+FVVDDKS
Sbjct: 446 TPGWSWIEVGDQVHRFVVDDKS 467



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 51/184 (27%), Positives = 86/184 (46%)
 Frame = -2

Query: 781 DTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARRVF 602
           DT+T   LL +C          ++H F+   G+  +V +   LI  Y+  G ++ A +VF
Sbjct: 107 DTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVF 166

Query: 601 ERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGLVE 422
           E M  RD+ +WNSMI      G  EEA+ ++ QM +  +  +  T + LL +C+H G + 
Sbjct: 167 EEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALH 226

Query: 421 EGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLLGS 242
            G+        +  L   I     ++DM+ + G L  AL+     P   D   W +++  
Sbjct: 227 MGVQMHRFAGER-RLVENIFVGNALIDMYAKCGSLASALSIFNSMPK-RDVFTWNSMIVG 284

Query: 241 CKIH 230
             +H
Sbjct: 285 YGVH 288


>emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
          Length = 978

 Score =  396 bits (1018), Expect = e-108
 Identities = 187/262 (71%), Positives = 221/262 (84%)
 Frame = -2

Query: 787  GVDTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARR 608
            G D FTLVSLLSSCAHVGAL  GVQMH+F  E   + N+FVGNALIDMY+KCG L  A  
Sbjct: 599  GFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALS 658

Query: 607  VFERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGL 428
            +F  M KRD+FTWNSMI+G GVHGRG+EAI+ F  ML+ G++PN ITFLGLLC CSHQGL
Sbjct: 659  IFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGL 718

Query: 427  VEEGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLL 248
            V+EG+ YF MMSS+F+L+PGIKHYGC+VD+FGRAG+L++AL  I+ SPS  DPVLWRTLL
Sbjct: 719  VKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLL 778

Query: 247  GSCKIHRNVGIGEVAMKKLVTLNGLGAGDCVLLAGIYSEAKDQQGASRMRKLIKNKGIKT 68
            GSCKIHRNV IGE+AM+ LV L  LGAGDCVLL+GIY+EAKD QG +RMRKLI+++GIKT
Sbjct: 779  GSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKT 838

Query: 67   TPGWSWIEIQNNVHKFVVDDKS 2
            TPGWSWIE+ + VH+FVVDDKS
Sbjct: 839  TPGWSWIEVGDQVHRFVVDDKS 860



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 51/184 (27%), Positives = 86/184 (46%)
 Frame = -2

Query: 781  DTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARRVF 602
            DT+T   LL +C          ++H F+   G+  +V +   LI  Y+  G ++ A +VF
Sbjct: 500  DTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVF 559

Query: 601  ERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGLVE 422
            E M  RD+ +WNSMI      G  EEA+ ++ QM +  +  +  T + LL +C+H G + 
Sbjct: 560  EEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALH 619

Query: 421  EGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLLGS 242
             G+        +  L   I     ++DM+ + G L  AL+     P   D   W +++  
Sbjct: 620  MGVQMHRFAGER-RLVENIFVGNALIDMYAKCGSLASALSIFNSMPK-RDVFTWNSMIVG 677

Query: 241  CKIH 230
              +H
Sbjct: 678  YGVH 681


>ref|XP_002323212.1| predicted protein [Populus trichocarpa] gi|222867842|gb|EEF04973.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  371 bits (952), Expect = e-100
 Identities = 178/262 (67%), Positives = 209/262 (79%)
 Frame = -2

Query: 787 GVDTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARR 608
           GVD FTLV LLSSC+HVGAL+ GV++H+   E G + NVFVGNALIDMY+KCG LD A  
Sbjct: 208 GVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGNALIDMYAKCGSLDGALE 267

Query: 607 VFERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGL 428
           VF  M  RD FTWNSMI+G GVHG G+EAI  F QML  G++PN I FLGLLC CSHQGL
Sbjct: 268 VFNGM-PRDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAGVRPNSIAFLGLLCGCSHQGL 326

Query: 427 VEEGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLL 248
           VEEG+ +F  MSSKF+++PGIKHYGC+VDM+GRAG+L+KAL  I DSP  DDPVLWR LL
Sbjct: 327 VEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEIIGDSPWQDDPVLWRILL 386

Query: 247 GSCKIHRNVGIGEVAMKKLVTLNGLGAGDCVLLAGIYSEAKDQQGASRMRKLIKNKGIKT 68
            S KIH+NV IGE+AM+ L  L  + AGDCVLLA IY+ A D+QG +RMRKLIK +GIKT
Sbjct: 387 SSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAGANDEQGVARMRKLIKKQGIKT 446

Query: 67  TPGWSWIEIQNNVHKFVVDDKS 2
           TPGWSWIE+ + VH+FVVDDKS
Sbjct: 447 TPGWSWIEVSDQVHRFVVDDKS 468



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 57/196 (29%), Positives = 94/196 (47%)
 Frame = -2

Query: 787 GVDTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARR 608
           G DTFT    L +C  + AL    ++H  +   G+  +V V   L+  Y + G ++ AR 
Sbjct: 107 GPDTFTFSFTLKACERIKALKKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARM 166

Query: 607 VFERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGL 428
           VF+ M +RD+  WN+MI      G  +EA+ ++  M  E +  +  T +GLL +CSH G 
Sbjct: 167 VFDNMPERDLVAWNAMISCYSQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGA 226

Query: 427 VEEGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLL 248
           +  G+    + S K  L   +     ++DM+ + G L  AL      P   D   W +++
Sbjct: 227 LNMGVKLHRIASEK-GLLRNVFVGNALIDMYAKCGSLDGALEVFNGMPR--DAFTWNSMI 283

Query: 247 GSCKIHRNVGIGEVAM 200
               +H   G G+ A+
Sbjct: 284 VGFGVH---GFGDEAI 296


>ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56550-like [Cucumis sativus]
          Length = 579

 Score =  364 bits (935), Expect = 1e-98
 Identities = 173/261 (66%), Positives = 211/261 (80%)
 Frame = -2

Query: 784 VDTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARRV 605
           VD FTLV L+SSCAH+GAL+ GVQMH+F  ENG   +++VGNALIDMY+KCG LD A  +
Sbjct: 204 VDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILI 263

Query: 604 FERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGLV 425
           F+RM+++DIFTWNSMI+G GVHGRG EAI  FQQML   +QPN +TFLGLLC CSHQGLV
Sbjct: 264 FDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLV 323

Query: 424 EEGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLLG 245
           +EG+ YF +MSSKF L+P +KHYGC+VD++GRAG+L KAL  + +S S +D VLWR LLG
Sbjct: 324 QEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNS-SHNDSVLWRILLG 382

Query: 244 SCKIHRNVGIGEVAMKKLVTLNGLGAGDCVLLAGIYSEAKDQQGASRMRKLIKNKGIKTT 65
           SCKIH+NV IGE+AM +L  L    AGDC+LLA IY+  KD+ G +RMRK+IK++G KTT
Sbjct: 383 SCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTT 442

Query: 64  PGWSWIEIQNNVHKFVVDDKS 2
           PGWSWIEI   VHKFVVDDKS
Sbjct: 443 PGWSWIEIGEQVHKFVVDDKS 463



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 51/184 (27%), Positives = 89/184 (48%)
 Frame = -2

Query: 781 DTFTLVSLLSSCAHVGALSFGVQMHKFVDENGFMGNVFVGNALIDMYSKCGGLDWARRVF 602
           DTFT   +L +C  + A     ++H  V   G+  +V V   L+  YS  G +  AR+VF
Sbjct: 104 DTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVF 163

Query: 601 ERMRKRDIFTWNSMIIGLGVHGRGEEAISLFQQMLLEGLQPNHITFLGLLCACSHQGLVE 422
           ++M  RD+  WN+MI      G  +EA+  + QM  E +  +  T +GL+ +C+H G + 
Sbjct: 164 DKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALN 223

Query: 421 EGLNYFMMMSSKFSLQPGIKHYGCVVDMFGRAGELQKALNFIQDSPSVDDPVLWRTLLGS 242
            G+      + +  L   +     ++DM+ + G L +A+  I D     D   W +++  
Sbjct: 224 IGVQ-MHRFARENGLDQSLYVGNALIDMYAKCGSLDQAI-LIFDRMQRKDIFTWNSMIVG 281

Query: 241 CKIH 230
             +H
Sbjct: 282 YGVH 285