BLASTX nr result
ID: Coptis24_contig00033157
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033157 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002442703.1| hypothetical protein SORBIDRAFT_08g001500 [S... 45 2e-07 emb|CBX25411.1| hypothetical_protein [Oryza glaberrima] 43 4e-07 ref|NP_001066063.1| Os12g0128800 [Oryza sativa Japonica Group] g... 43 4e-07 gb|EEC68794.1| hypothetical protein OsI_37346 [Oryza sativa Indi... 43 4e-07 gb|ABA96373.1| Alpha-L-arabinofuranosidase C-terminus family pro... 43 4e-07 >ref|XP_002442703.1| hypothetical protein SORBIDRAFT_08g001500 [Sorghum bicolor] gi|241943396|gb|EES16541.1| hypothetical protein SORBIDRAFT_08g001500 [Sorghum bicolor] Length = 204 Score = 44.7 bits (104), Expect(2) = 2e-07 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 1/26 (3%) Frame = +3 Query: 186 WRRI-DAIFLNSWQQYGTPSYWVQQF 260 W+ I DAI NSWQQYGTPSYW+Q F Sbjct: 51 WKWIPDAIVFNSWQQYGTPSYWMQTF 76 Score = 35.0 bits (79), Expect(2) = 2e-07 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +2 Query: 137 NGSLLAALAETGFLIGMEKN 196 NGSLLA+LAE FLIG+EKN Sbjct: 30 NGSLLASLAEAAFLIGVEKN 49 >emb|CBX25411.1| hypothetical_protein [Oryza glaberrima] Length = 656 Score = 42.7 bits (99), Expect(2) = 4e-07 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = +3 Query: 198 DAIFLNSWQQYGTPSYWVQQF 260 DAI NSWQQYGTPSYW+Q + Sbjct: 516 DAIVFNSWQQYGTPSYWMQTY 536 Score = 36.2 bits (82), Expect(2) = 4e-07 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%) Frame = +2 Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220 NGSLLA+LAE FLIG+EKN C P FV Sbjct: 473 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 506 >ref|NP_001066063.1| Os12g0128800 [Oryza sativa Japonica Group] gi|113648570|dbj|BAF29082.1| Os12g0128800, partial [Oryza sativa Japonica Group] Length = 571 Score = 42.7 bits (99), Expect(2) = 4e-07 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = +3 Query: 198 DAIFLNSWQQYGTPSYWVQQF 260 DAI NSWQQYGTPSYW+Q + Sbjct: 431 DAIVFNSWQQYGTPSYWMQTY 451 Score = 36.2 bits (82), Expect(2) = 4e-07 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%) Frame = +2 Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220 NGSLLA+LAE FLIG+EKN C P FV Sbjct: 388 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 421 >gb|EEC68794.1| hypothetical protein OsI_37346 [Oryza sativa Indica Group] Length = 551 Score = 42.7 bits (99), Expect(2) = 4e-07 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = +3 Query: 198 DAIFLNSWQQYGTPSYWVQQF 260 DAI NSWQQYGTPSYW+Q + Sbjct: 382 DAIVFNSWQQYGTPSYWMQTY 402 Score = 36.2 bits (82), Expect(2) = 4e-07 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%) Frame = +2 Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220 NGSLLA+LAE FLIG+EKN C P FV Sbjct: 339 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 372 >gb|ABA96373.1| Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa Japonica Group] gi|215737298|dbj|BAG96227.1| unnamed protein product [Oryza sativa Japonica Group] Length = 508 Score = 42.7 bits (99), Expect(2) = 4e-07 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = +3 Query: 198 DAIFLNSWQQYGTPSYWVQQF 260 DAI NSWQQYGTPSYW+Q + Sbjct: 368 DAIVFNSWQQYGTPSYWMQTY 388 Score = 36.2 bits (82), Expect(2) = 4e-07 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%) Frame = +2 Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220 NGSLLA+LAE FLIG+EKN C P FV Sbjct: 325 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 358