BLASTX nr result

ID: Coptis24_contig00033157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033157
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442703.1| hypothetical protein SORBIDRAFT_08g001500 [S...    45   2e-07
emb|CBX25411.1| hypothetical_protein [Oryza glaberrima]                43   4e-07
ref|NP_001066063.1| Os12g0128800 [Oryza sativa Japonica Group] g...    43   4e-07
gb|EEC68794.1| hypothetical protein OsI_37346 [Oryza sativa Indi...    43   4e-07
gb|ABA96373.1| Alpha-L-arabinofuranosidase C-terminus family pro...    43   4e-07

>ref|XP_002442703.1| hypothetical protein SORBIDRAFT_08g001500 [Sorghum bicolor]
           gi|241943396|gb|EES16541.1| hypothetical protein
           SORBIDRAFT_08g001500 [Sorghum bicolor]
          Length = 204

 Score = 44.7 bits (104), Expect(2) = 2e-07
 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = +3

Query: 186 WRRI-DAIFLNSWQQYGTPSYWVQQF 260
           W+ I DAI  NSWQQYGTPSYW+Q F
Sbjct: 51  WKWIPDAIVFNSWQQYGTPSYWMQTF 76



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +2

Query: 137 NGSLLAALAETGFLIGMEKN 196
           NGSLLA+LAE  FLIG+EKN
Sbjct: 30  NGSLLASLAEAAFLIGVEKN 49


>emb|CBX25411.1| hypothetical_protein [Oryza glaberrima]
          Length = 656

 Score = 42.7 bits (99), Expect(2) = 4e-07
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 198 DAIFLNSWQQYGTPSYWVQQF 260
           DAI  NSWQQYGTPSYW+Q +
Sbjct: 516 DAIVFNSWQQYGTPSYWMQTY 536



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%)
 Frame = +2

Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220
           NGSLLA+LAE  FLIG+EKN       C  P FV
Sbjct: 473 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 506


>ref|NP_001066063.1| Os12g0128800 [Oryza sativa Japonica Group]
           gi|113648570|dbj|BAF29082.1| Os12g0128800, partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score = 42.7 bits (99), Expect(2) = 4e-07
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 198 DAIFLNSWQQYGTPSYWVQQF 260
           DAI  NSWQQYGTPSYW+Q +
Sbjct: 431 DAIVFNSWQQYGTPSYWMQTY 451



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%)
 Frame = +2

Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220
           NGSLLA+LAE  FLIG+EKN       C  P FV
Sbjct: 388 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 421


>gb|EEC68794.1| hypothetical protein OsI_37346 [Oryza sativa Indica Group]
          Length = 551

 Score = 42.7 bits (99), Expect(2) = 4e-07
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 198 DAIFLNSWQQYGTPSYWVQQF 260
           DAI  NSWQQYGTPSYW+Q +
Sbjct: 382 DAIVFNSWQQYGTPSYWMQTY 402



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%)
 Frame = +2

Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220
           NGSLLA+LAE  FLIG+EKN       C  P FV
Sbjct: 339 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 372


>gb|ABA96373.1| Alpha-L-arabinofuranosidase C-terminus family protein, expressed
           [Oryza sativa Japonica Group]
           gi|215737298|dbj|BAG96227.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 508

 Score = 42.7 bits (99), Expect(2) = 4e-07
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 198 DAIFLNSWQQYGTPSYWVQQF 260
           DAI  NSWQQYGTPSYW+Q +
Sbjct: 368 DAIVFNSWQQYGTPSYWMQTY 388



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 6/34 (17%)
 Frame = +2

Query: 137 NGSLLAALAETGFLIGMEKN------RCNIPEFV 220
           NGSLLA+LAE  FLIG+EKN       C  P FV
Sbjct: 325 NGSLLASLAEAAFLIGLEKNSDVVQMACYAPLFV 358


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