BLASTX nr result

ID: Coptis24_contig00033153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033153
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...    52   4e-06

>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
           predicted protein [Populus trichocarpa]
          Length = 1950

 Score = 52.0 bits (123), Expect(2) = 4e-06
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 84  KHLLDM*YRMHPKISCFPNSKFYQEKVL 1
           KHLLDM YRMHP ISCFPNSKFY  ++L
Sbjct: 485 KHLLDMQYRMHPSISCFPNSKFYFSQIL 512



 Score = 23.5 bits (49), Expect(2) = 4e-06
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -1

Query: 127 RSLFERLSSMG 95
           RSLFERLSS+G
Sbjct: 472 RSLFERLSSLG 482


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