BLASTX nr result

ID: Coptis24_contig00033144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033144
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    83   6e-14
ref|XP_002437558.1| hypothetical protein SORBIDRAFT_10g029370 [S...    82   1e-13
ref|NP_001058526.1| Os06g0707300 [Oryza sativa Japonica Group] g...    80   4e-13
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    79   8e-13
ref|NP_001168586.1| uncharacterized protein LOC100382370 [Zea ma...    76   5e-12

>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
 Frame = -2

Query: 545 DWSELREELVYSISQRFL-LPDMIRFGCVCPSWKSVSAPALRHK--GRLPWLVVPYTADR 375
           +WSEL +EL+ +I+Q+     D I    VC SW S + P   H    +LPWL++PY  + 
Sbjct: 3   NWSELPQELLQTITQKQSNYVDYISTRAVCKSWWS-AIPKKPHDLLCQLPWLLLPYHKN- 60

Query: 374 NVDESDNYCRDGLLGFFSILDGITYKIETPELRERRILGASFGWFTTVHGNSEMQLFHPL 195
               + N+      GF+++ DG TY +E PE  E+R  G+S GW   V     + L +PL
Sbjct: 61  ----NPNH-----RGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPL 111

Query: 194 TKKIVRLPAISKFPFVAGIRTDEEERLIYSVYIPDGTVFDIGSGGYMRDTLLHKAKTFFD 15
           TK  + LP++S FP+       E  R I          F+  +   +R+T + KA    D
Sbjct: 112 TKARIELPSLSTFPYFPTEVVYENSRNI-------NEYFNTKAKLRIRETYIRKAIVSED 164

Query: 14  P 12
           P
Sbjct: 165 P 165


>ref|XP_002437558.1| hypothetical protein SORBIDRAFT_10g029370 [Sorghum bicolor]
           gi|241915781|gb|EER88925.1| hypothetical protein
           SORBIDRAFT_10g029370 [Sorghum bicolor]
          Length = 459

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
 Frame = -2

Query: 542 WSELREELVYSISQRFLLPDMIRFGCVCPSWKSV-SAPALRHKGRLPWLVVPYTADR--- 375
           W++L  +L+ S+  R  +PD +RF  VC +W+S  +A  ++H    PWL++P+       
Sbjct: 14  WADLPRDLLESVLARLPVPDRVRFPAVCTAWQSAHTAAGIQHAALSPWLMLPFNPTARVD 73

Query: 374 NVDESDNYC-RDGLLGFFSILDGITYKIE--TPELRERRILGAS-FGWFTTVHGNSEMQL 207
           +VD++D  C +  ++ F S+ +   Y I    P  RER  +G+S  GW  T    SE+ L
Sbjct: 74  SVDDNDGSCAKLTVVRFLSLAEDRAYAIRQPAPAARERLCVGSSPDGWLVTADACSELSL 133

Query: 206 FHPLTKKIVRLPAISKFPFV 147
            +P+T   +RLP  +  PFV
Sbjct: 134 LNPVTGAQLRLPPAATLPFV 153


>ref|NP_001058526.1| Os06g0707300 [Oryza sativa Japonica Group]
           gi|53792591|dbj|BAD53606.1| unknown protein [Oryza
           sativa Japonica Group] gi|53792784|dbj|BAD53819.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113596566|dbj|BAF20440.1| Os06g0707300 [Oryza sativa
           Japonica Group] gi|125556699|gb|EAZ02305.1| hypothetical
           protein OsI_24405 [Oryza sativa Indica Group]
           gi|215715330|dbj|BAG95081.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 472

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
 Frame = -2

Query: 542 WSELREELVYSISQRFLLPDMIRFGCVCPSWKSVSAPALRHKGRL---PWLVVPYTAD-R 375
           W++L  +L+ S+  R  +PD +RF  VC +W+S  A +   + R    PWL++P+    R
Sbjct: 16  WADLPRDLLESVLGRLPVPDRLRFPGVCTAWQSADAASATARFRAAQPPWLMLPFNPTAR 75

Query: 374 NVDESDNYCRDGLL---GFFSILDGITYKIE--TPELRERRILGASFGWFTTVHGNSEMQ 210
               S     DG      F S+ DG  Y I    P + ER  +G+S GW  T    SE+ 
Sbjct: 76  RQSPSGGGGGDGRFLEARFLSLSDGRAYAIPQPAPPVSERLCVGSSDGWLVTADAASELH 135

Query: 209 LFHPLTKKIVRLPAISKFPFVAGIR 135
           L +PLT   V+LP+++  PFV   R
Sbjct: 136 LLNPLTGAQVQLPSVTTLPFVDASR 160


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
 Frame = -2

Query: 542 WSELREELVYSISQRFL-LPDMIRFGCVCPSWKSVSAPALRHK--GRLPWLVVPYTADRN 372
           WSEL +EL+ +I+Q+     D I    VC SW S + P   H    RLPWL++P+  D  
Sbjct: 4   WSELPQELLQTITQKQTNYVDYISTRAVCKSWWS-AIPKKPHDLLCRLPWLLLPHHKD-- 60

Query: 371 VDESDNYCRDGLLGFFSILDGITYKIETPELRERRILGASFGWFTTVHGNSEMQLFHPLT 192
              + N+      GF++  DG TY +E PE  ++R  G+S GW   V     + L +PLT
Sbjct: 61  ---NPNH-----RGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLT 112

Query: 191 KKIVRLPAISKFP 153
           K  + LP++S FP
Sbjct: 113 KSRIELPSLSTFP 125


>ref|NP_001168586.1| uncharacterized protein LOC100382370 [Zea mays]
           gi|223949381|gb|ACN28774.1| unknown [Zea mays]
           gi|413943184|gb|AFW75833.1| hypothetical protein
           ZEAMMB73_857643 [Zea mays]
          Length = 460

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
 Frame = -2

Query: 542 WSELREELVYSISQRFLLPDMIRFGCVCPSWKSVSAPALRHKGRL----PWLVVPYTADR 375
           W++L  +L+ S+  R  +PD++RF  VC +W+SV A A     +     PWL++P+    
Sbjct: 10  WADLPRDLLESVLARLPVPDLVRFPAVCTAWQSVHAAAAARLRQATPSSPWLMLPFNP-- 67

Query: 374 NVDESDNYCRDGLLGFFSILDGITYKIE--TPELRERRILGASF-GWFTTVHGNSEMQLF 204
               +    +  +  F S+ +G  Y I    P  R+R  +G+S  GW  T    SE+ L 
Sbjct: 68  -TARAGGVAKLSVARFLSLAEGRVYVIRQPAPAARDRLCVGSSADGWLVTADARSELSLL 126

Query: 203 HPLTKKIVRLPAISKFPFV 147
           +P+T   +RLP  +  PFV
Sbjct: 127 NPITGAQLRLPPAATLPFV 145


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