BLASTX nr result

ID: Coptis24_contig00033143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033143
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    69   3e-10
ref|XP_003603678.1| hypothetical protein MTR_3g111040 [Medicago ...    64   1e-08
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    62   5e-08
ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago ...    61   1e-07
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    60   2e-07

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
 Frame = +2

Query: 35  GVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAF 214
           G +FR  NA  L   A  +G  ++Y  E  AI+ V E+A  +NW+ +W+E DS   V+AF
Sbjct: 249 GGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAF 308

Query: 215 RK-GTIPWKLQARW---KRAIHKLDYGHISHTYREANFGEDAGSQEG 343
           +K   IP +L+ RW   ++ + ++++  I+H YRE N   D  + +G
Sbjct: 309 KKMSMIPCRLRNRWINCRKLLCRMNF-VITHIYREDNRCADKLASKG 354


>ref|XP_003603678.1| hypothetical protein MTR_3g111040 [Medicago truncatula]
           gi|355492726|gb|AES73929.1| hypothetical protein
           MTR_3g111040 [Medicago truncatula]
          Length = 132

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
 Frame = +2

Query: 35  GVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAF 214
           G IFR Y    LG  A  +G  + ++ E   ++L  E A   NW +LW+E DS SA  AF
Sbjct: 5   GGIFRDYCGTFLGGFATNVGRVSVFEVEVLGLILAMEYAASNNWSRLWLESDSSSAAQAF 64

Query: 215 RK-GTIPWKLQARWKRAIHKLDYGHISHTYREAN 313
            K   I   L+ RW    H   +   SH +RE N
Sbjct: 65  HKPSLIHVGLRNRWHNCTHNGMFIICSHIFREGN 98


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
 Frame = +2

Query: 26  GGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAV 205
           G  G +FR +    LG  A  +G  T + AE  A +   E +   N + +W+E DSK  V
Sbjct: 26  GATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVV 85

Query: 206 LAFRKGT-IPWKLQARWKR--AIHKLDYGHISHTYREANFGEDAGSQEG 343
            AF     +PW+L+ RW    A+ +      +H +RE N G D+ ++ G
Sbjct: 86  KAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGNAGADSLAKNG 134


>ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago truncatula]
           gi|355484897|gb|AES66100.1| hypothetical protein
           MTR_2g062550 [Medicago truncatula]
          Length = 315

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +2

Query: 44  FRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAVLAFRK- 220
           FR Y    LG  +  +G+ T ++AE T ++L  E A   NW +LWVE DS SAVLAF+  
Sbjct: 246 FRDYTGAFLGGFSSNLGLGTVFEAELTGLMLAIEYAASHNWSRLWVESDSSSAVLAFKNH 305

Query: 221 GTIPWKLQAR 250
             IP + + R
Sbjct: 306 SAIPIRFRNR 315


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
 Frame = +2

Query: 26  GGAGVIFRGYNAELLGVLAHGMGMTTSYDAECTAIVLVTEVAGGKNWKQLWVECDSKSAV 205
           G  GVIFR       G  A  +G  T+ +AE +A +   E A   +   +W+E DS + +
Sbjct: 268 GSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVI 327

Query: 206 LAFRKGT-IPWKLQARWK------RAIHKLDYGHISHTYREANFGEDAGSQEG 343
            AF   T +PWK+  RW       R+I  L     +H  RE N   DA ++ G
Sbjct: 328 RAFHFNTGVPWKMHIRWHNCLLFCRSIRSL----CTHVNREGNLVADALAKNG 376


Top