BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033133
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35582.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34

>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  159 bits (403), Expect = 2e-37
 Identities = 67/99 (67%), Positives = 85/99 (85%)
 Frame = +2

Query: 2   DANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIRK 181
           DANIWGALLGACR+YGNLEL  WAAEHLFELKPEHSG Y LL+NMYAE+G WDE+++IR+
Sbjct: 511 DANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRE 570

Query: 182 MMKSKRTEKNPGCSWVEVHNRVHAFAVGESLQDQEMGLW 298
           +MKS+  +K+PGCSWV++  + HAF VGE ++  ++GLW
Sbjct: 571 LMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGLDLGLW 609


>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  154 bits (388), Expect = 9e-36
 Identities = 66/101 (65%), Positives = 87/101 (86%)
 Frame = +2

Query: 2   DANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIRK 181
           DANIWGALLGACR+YGN+ELGR AAEHLFELKP+H G Y+LL+N+YAE+G WDE++KIR+
Sbjct: 581 DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 640

Query: 182 MMKSKRTEKNPGCSWVEVHNRVHAFAVGESLQDQEMGLWSA 304
           +MKS+  +KNPGCSWV+++++VHAF   E ++  E+G W A
Sbjct: 641 LMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFELGDWLA 681


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  154 bits (388), Expect = 9e-36
 Identities = 66/101 (65%), Positives = 87/101 (86%)
 Frame = +2

Query: 2    DANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIRK 181
            DANIWGALLGACR+YGN+ELGR AAEHLFELKP+H G Y+LL+N+YAE+G WDE++KIR+
Sbjct: 730  DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 789

Query: 182  MMKSKRTEKNPGCSWVEVHNRVHAFAVGESLQDQEMGLWSA 304
            +MKS+  +KNPGCSWV+++++VHAF   E ++  E+G W A
Sbjct: 790  LMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFELGDWLA 830


>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 813

 Score =  149 bits (376), Expect = 2e-34
 Identities = 63/99 (63%), Positives = 81/99 (81%)
 Frame = +2

Query: 2    DANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIRK 181
            D NIWGALLGACR++GN+ELG WAAEHLFELKP+H G Y+LL+NMYAE+  WDE++K+R+
Sbjct: 710  DTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRE 769

Query: 182  MMKSKRTEKNPGCSWVEVHNRVHAFAVGESLQDQEMGLW 298
            +MKS+  +KNPGCSWV+V + VHAF VGE +   +   W
Sbjct: 770  LMKSRGAKKNPGCSWVQVGDLVHAFLVGEKIDSLDDDFW 808


>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  147 bits (372), Expect = 7e-34
 Identities = 61/101 (60%), Positives = 84/101 (83%)
 Frame = +2

Query: 2   DANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIRK 181
           DAN+WGALLGACR++G +EL  WAAEHLF+LKP+HSG Y +L+NMYAE+G+WDE++++RK
Sbjct: 578 DANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRK 637

Query: 182 MMKSKRTEKNPGCSWVEVHNRVHAFAVGESLQDQEMGLWSA 304
           +MKS+  +KNPGCSWV++ N+VHAF  GE + + +  L  A
Sbjct: 638 LMKSRGAKKNPGCSWVQIDNQVHAFVAGERMMNVDSSLLCA 678