BLASTX nr result

ID: Coptis24_contig00033117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033117
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515187.1| multidrug resistance protein 1, 2, putative ...   161   4e-38
dbj|BAM11098.1| ABC protein [Coptis japonica]                         161   6e-38
ref|XP_002515184.1| multidrug resistance protein 1, 2, putative ...   160   1e-37
ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, AB...   160   1e-37
ref|XP_003550577.1| PREDICTED: ABC transporter B family member 1...   159   2e-37

>ref|XP_002515187.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545667|gb|EEF47171.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1269

 Score =  161 bits (408), Expect = 4e-38
 Identities = 83/96 (86%), Positives = 94/96 (97%)
 Frame = -2

Query: 289  HKFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 110
            HKFIS+++QGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV
Sbjct: 1143 HKFISSLQQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 1202

Query: 109  QCALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNGV 2
            Q ALD+VM++RTTIVVAHRLS+I++A +IAV+KNGV
Sbjct: 1203 QDALDRVMVNRTTIVVAHRLSTIQNADVIAVVKNGV 1238



 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/94 (72%), Positives = 82/94 (87%)
 Frame = -2

Query: 286 KFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQ 107
           KFI  + QG DT+ GE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESERVVQ
Sbjct: 484 KFIDKLPQGLDTMAGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQ 543

Query: 106 CALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNG 5
            ALD++M++RTT++VAHRLS+IR+A +IAVI  G
Sbjct: 544 EALDRIMVNRTTVIVAHRLSTIRNADVIAVIHRG 577


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/96 (85%), Positives = 94/96 (97%)
 Frame = -2

Query: 289  HKFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 110
            HKFISA++QGYDT+VGERGVQLSGGQKQRVAIARA+VK+PKILLLDEATSALDAESERVV
Sbjct: 1168 HKFISALQQGYDTMVGERGVQLSGGQKQRVAIARAMVKAPKILLLDEATSALDAESERVV 1227

Query: 109  QCALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNGV 2
            Q ALD+VM++RTTIVVAHRLS+I++A LIAV+KNGV
Sbjct: 1228 QDALDKVMVNRTTIVVAHRLSTIKNADLIAVVKNGV 1263



 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/94 (74%), Positives = 81/94 (86%)
 Frame = -2

Query: 286 KFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQ 107
           KFI  + QG DTLVGE G  LSGGQKQRVAIARAI+K P+ILLLDEATSALDAESE +VQ
Sbjct: 516 KFIDKLPQGLDTLVGEHGTHLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEHIVQ 575

Query: 106 CALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNG 5
            ALD+VM++RTT+VVAHRLS+IRSA +IAV+  G
Sbjct: 576 EALDRVMVNRTTVVVAHRLSTIRSADMIAVVHRG 609


>ref|XP_002515184.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545664|gb|EEF47168.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1301

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/96 (84%), Positives = 94/96 (97%)
 Frame = -2

Query: 289  HKFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 110
            HKFIS+++QGY+T+VGERG+QLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV
Sbjct: 1175 HKFISSLQQGYETMVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 1234

Query: 109  QCALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNGV 2
            Q ALD+VM++RTTIVVAHRLS+I++A LIAV+KNGV
Sbjct: 1235 QDALDRVMVNRTTIVVAHRLSTIKNADLIAVVKNGV 1270



 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/76 (69%), Positives = 69/76 (90%)
 Frame = -2

Query: 232 VQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQCALDQVMIDRTTIVVAHR 53
           +   GGQKQR+AIARAI+K+P+ILLLDEATSALDAESE VVQ ALD++M+DRTT++VAHR
Sbjct: 534 LSFQGGQKQRIAIARAILKNPRILLLDEATSALDAESEHVVQEALDRIMVDRTTVIVAHR 593

Query: 52  LSSIRSASLIAVIKNG 5
           L+++R+A++IAVI  G
Sbjct: 594 LTTVRNANIIAVIHRG 609


>ref|XP_002301547.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222843273|gb|EEE80820.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1224

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/96 (83%), Positives = 94/96 (97%)
 Frame = -2

Query: 289  HKFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 110
            HKFIS+++QGYDT+VGERG+QLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV
Sbjct: 1098 HKFISSLQQGYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 1157

Query: 109  QCALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNGV 2
            Q ALD+VM++RTT+VVAHRLS+I++A +IAV+KNGV
Sbjct: 1158 QDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGV 1193



 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/94 (71%), Positives = 83/94 (88%)
 Frame = -2

Query: 286 KFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQ 107
           KFI  + QG DT+VGE G QLSGGQKQR+AIARAI+K P+ILLLDEATSALDAESER+VQ
Sbjct: 443 KFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQ 502

Query: 106 CALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNG 5
            ALD++M++RTT++VAHRLS++R+A +IAVI  G
Sbjct: 503 EALDRIMVNRTTVIVAHRLSTVRNADMIAVIYRG 536


>ref|XP_003550577.1| PREDICTED: ABC transporter B family member 11-like [Glycine max]
          Length = 1275

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/96 (84%), Positives = 93/96 (96%)
 Frame = -2

Query: 289  HKFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVV 110
            H+FIS++++GYDTLVGERGVQLSGGQKQRVAIARAIVK+PKILLLDEATSALDAESE+VV
Sbjct: 1150 HRFISSLQKGYDTLVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVV 1209

Query: 109  QCALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNGV 2
            Q ALD+VM+DRTTIVVAHRLS+I+ A LIAV+KNGV
Sbjct: 1210 QDALDRVMVDRTTIVVAHRLSTIKGADLIAVVKNGV 1245



 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/94 (74%), Positives = 82/94 (87%)
 Frame = -2

Query: 286 KFISAMKQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQ 107
           KFI  + QG DT+VGE G QLSGGQKQRVAIARAI+K P+ILLLDEATSALDAESER+VQ
Sbjct: 491 KFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQ 550

Query: 106 CALDQVMIDRTTIVVAHRLSSIRSASLIAVIKNG 5
            ALD++MI+RTT++VAHRLS+IR+A  IAVI  G
Sbjct: 551 EALDRIMINRTTVIVAHRLSTIRNADTIAVIHQG 584


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