BLASTX nr result

ID: Coptis24_contig00033090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033090
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277622.1| PREDICTED: protein DA1-related 2 [Vitis vini...   122   5e-26
ref|XP_002524242.1| zinc ion binding protein, putative [Ricinus ...   104   1e-20
emb|CAN69394.1| hypothetical protein VITISV_021011 [Vitis vinifera]    99   6e-19
ref|XP_002316256.1| predicted protein [Populus trichocarpa] gi|2...    89   6e-16
ref|XP_003545247.1| PREDICTED: protein DA1-related 2-like [Glyci...    84   1e-14

>ref|XP_002277622.1| PREDICTED: protein DA1-related 2 [Vitis vinifera]
           gi|296086166|emb|CBI31607.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  122 bits (306), Expect = 5e-26
 Identities = 66/124 (53%), Positives = 80/124 (64%), Gaps = 7/124 (5%)
 Frame = -3

Query: 352 MSSSGVNHFTQPCIHGQ-----SEGKSRIMKWLYKFFKGGGSVDGLENGRQQAFLEDGNM 188
           M+SSGVNH +QPCI+GQ     +E KSR MKWL K FK GGS  G+  G+   FL D NM
Sbjct: 1   MASSGVNHLSQPCIYGQLASSYAERKSRFMKWLSKLFKSGGSGRGVIGGQHPQFLGDENM 60

Query: 187 AWHAPRRSTDEHSRT--ENKELDRAMALPLAEDLSRPNGYRRPADCGEDLARALQESLNM 14
            W  P RS D   R+  E ++LD A+AL LAEDL RP GY   +D  EDL+R+L +SLN 
Sbjct: 61  VWRVPPRSLDGRPRSDKEKEDLDHAIALSLAEDLKRPKGYGWGSDTDEDLSRSLHDSLNT 120

Query: 13  PSCP 2
            S P
Sbjct: 121 SSYP 124


>ref|XP_002524242.1| zinc ion binding protein, putative [Ricinus communis]
           gi|223536519|gb|EEF38166.1| zinc ion binding protein,
           putative [Ricinus communis]
          Length = 498

 Score =  104 bits (260), Expect = 1e-20
 Identities = 65/119 (54%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
 Frame = -3

Query: 349 SSSGVNHFTQPCIHGQSEGKSRIMKWLYKFFKGGGSVDGLENGRQQAFLEDGNM-AWHAP 173
           SSSGVNH + PCI+   E KSR MKWL K FKGG +  G    R    L + NM +W AP
Sbjct: 10  SSSGVNHISNPCIY---ERKSRFMKWLSKLFKGGPTRGG--GSRHPQLLGEENMVSWRAP 64

Query: 172 RRSTDEHSR--TENKELDRAMALPLAEDLSRPNGYRRPADCGEDLARALQESLNMPSCP 2
            RS DEH+R   E +E D AMAL LAED  RP GYR   D  E+LARALQ+SLN    P
Sbjct: 65  ARSLDEHTRPGKEKEESDHAMALSLAEDWKRP-GYRWRTDNDEELARALQDSLNPSGYP 122


>emb|CAN69394.1| hypothetical protein VITISV_021011 [Vitis vinifera]
          Length = 440

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
 Frame = -3

Query: 301 SEGKSRIMKWLYKFFKGGGSVDGLENGRQQAFLEDGNMAWHAPRRSTDEHSRT--ENKEL 128
           +E KSR MKWL K FK GGS  G+  G+   FL D NM W  P RS D   R+  E ++L
Sbjct: 15  AERKSRFMKWLSKLFKSGGSGRGVIGGQHPQFLGDENMVWRVPPRSLDGRPRSDKEKEDL 74

Query: 127 DRAMALPLAEDLSRPNGYRRPADCGEDLARALQESLNMPSCP 2
           D A+AL LAEDL RP GY   +D  EDL+R+L +SLN  S P
Sbjct: 75  DHAIALSLAEDLKRPKGYGWRSDTDEDLSRSLHDSLNTSSYP 116


>ref|XP_002316256.1| predicted protein [Populus trichocarpa] gi|222865296|gb|EEF02427.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 54/128 (42%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
 Frame = -3

Query: 346 SSGVNHFTQPCIHGQSEG---------KSRIMKWLYKFFKGGGSVDGLENG----RQQAF 206
           +SGV+H + PCI+G   G         KSR MKWL K FK G +  G   G         
Sbjct: 5   NSGVHHISNPCIYGMFSGDFVSSYAERKSRFMKWLGKLFKSGSNRGGARGGVGGRAHPQI 64

Query: 205 LEDGNMAWHAPRRSTDEHSRTENKELDRAMALPLAEDLSRPNGYRRPADCGEDLARALQE 26
           L + N+ W AP RS D+ SRT  KE   A+AL +AED  +P+G  R  +  +DLAR+LQ+
Sbjct: 65  LGEENVVWSAPARSVDDRSRT-GKERGDAIALAMAEDWKQPSGCSRGTN-DQDLARSLQD 122

Query: 25  SLNMPSCP 2
           +LN  S P
Sbjct: 123 TLNSSSFP 130


>ref|XP_003545247.1| PREDICTED: protein DA1-related 2-like [Glycine max]
          Length = 492

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
 Frame = -3

Query: 346 SSGVNHFTQPCIHGQSEGKSRIMKWLYKFFKGGGSVDGLENGRQQAFLEDGNMAWHAPRR 167
           SS VNH + PCI+   E KS  MKWL K F+GG +      GR      + +  W AP R
Sbjct: 4   SSDVNHLSHPCIY---ERKSGFMKWLNKLFRGGPNRG--RGGRHLHEPAEESRVWGAPSR 58

Query: 166 STDEHSRT--ENKELDRAMALPLAEDLSRPNGYRRPADCGEDLARALQESLNMPSCP 2
           + D+ +R   E ++L  AMAL  AEDL RPNGY    D G+D ++A +++LN  + P
Sbjct: 59  ALDDRARAQKEKEDLGHAMALSSAEDLKRPNGYNWGEDTGDDYSKAPRDTLNSSAHP 115


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