BLASTX nr result

ID: Coptis24_contig00033089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033089
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285347.2| PREDICTED: UPF0326 protein At4g17486 isoform...   160   8e-38
ref|XP_002324900.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002309663.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_002515452.1| conserved hypothetical protein [Ricinus comm...   154   9e-36
ref|XP_004138707.1| PREDICTED: deSI-like protein At4g17486-like ...   149   3e-34

>ref|XP_002285347.2| PREDICTED: UPF0326 protein At4g17486 isoform 1 [Vitis vinifera]
           gi|296082083|emb|CBI21088.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  160 bits (406), Expect = 8e-38
 Identities = 70/97 (72%), Positives = 85/97 (87%)
 Frame = +3

Query: 3   EPKRCPGFKFRKSIMIGKTDLGSKDIRAFMEKLAQEYVGNTYNLITKNCNHFCNDICQRL 182
           EPK+CPGF FRKSI+IG+TDLG KD+R+FMEKLA+EY GNTYNLIT+NCNHFCND+C RL
Sbjct: 66  EPKQCPGFTFRKSILIGRTDLGPKDVRSFMEKLAEEYSGNTYNLITRNCNHFCNDVCNRL 125

Query: 183 TGSRIPRWVNRIARIGFLLDCVLPVDLSQVGHQKSAV 293
           TG  IPRWVNR+AR+GFL +CVLPV L++   Q++ V
Sbjct: 126 TGKPIPRWVNRLARLGFLCNCVLPVSLNETKVQQTEV 162


>ref|XP_002324900.1| predicted protein [Populus trichocarpa] gi|222866334|gb|EEF03465.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  158 bits (399), Expect = 5e-37
 Identities = 68/89 (76%), Positives = 82/89 (92%)
 Frame = +3

Query: 3   EPKRCPGFKFRKSIMIGKTDLGSKDIRAFMEKLAQEYVGNTYNLITKNCNHFCNDICQRL 182
           EPK+CPGF FRKSI+IG+TDLG K++R FMEKLAQE+ GNTY+LITKNCNHFCND+C +L
Sbjct: 68  EPKQCPGFMFRKSILIGRTDLGPKEVRVFMEKLAQEFPGNTYHLITKNCNHFCNDVCLKL 127

Query: 183 TGSRIPRWVNRIARIGFLLDCVLPVDLSQ 269
           TG +IPRWVNR+ARIGFL +CVLPV+L+Q
Sbjct: 128 TGKKIPRWVNRLARIGFLCNCVLPVELNQ 156


>ref|XP_002309663.1| predicted protein [Populus trichocarpa] gi|222855639|gb|EEE93186.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  155 bits (393), Expect = 2e-36
 Identities = 67/89 (75%), Positives = 81/89 (91%)
 Frame = +3

Query: 3   EPKRCPGFKFRKSIMIGKTDLGSKDIRAFMEKLAQEYVGNTYNLITKNCNHFCNDICQRL 182
           EPK+CPGF FRKSI+IG+TDLG K++RAFMEKLAQEY GNTY+LITKNCNHFCND+C +L
Sbjct: 64  EPKQCPGFMFRKSILIGRTDLGPKEVRAFMEKLAQEYPGNTYHLITKNCNHFCNDVCFKL 123

Query: 183 TGSRIPRWVNRIARIGFLLDCVLPVDLSQ 269
           TG  IP+WVNR+AR+GFL +CVLP +L+Q
Sbjct: 124 TGKTIPQWVNRLARLGFLCNCVLPAELNQ 152


>ref|XP_002515452.1| conserved hypothetical protein [Ricinus communis]
           gi|223545396|gb|EEF46901.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  154 bits (388), Expect = 9e-36
 Identities = 66/89 (74%), Positives = 80/89 (89%)
 Frame = +3

Query: 3   EPKRCPGFKFRKSIMIGKTDLGSKDIRAFMEKLAQEYVGNTYNLITKNCNHFCNDICQRL 182
           EPK+CPGF FRKSI+IG+TDLG K++RAFMEKLA EY GN+Y+LITKNCNHFCND+C +L
Sbjct: 68  EPKQCPGFTFRKSILIGRTDLGPKEVRAFMEKLAHEYSGNSYHLITKNCNHFCNDVCIKL 127

Query: 183 TGSRIPRWVNRIARIGFLLDCVLPVDLSQ 269
           TG  IPRWVNR+AR+GFL +CVLP +L+Q
Sbjct: 128 TGKTIPRWVNRLARLGFLCNCVLPAELNQ 156


>ref|XP_004138707.1| PREDICTED: deSI-like protein At4g17486-like [Cucumis sativus]
           gi|449499262|ref|XP_004160769.1| PREDICTED: deSI-like
           protein At4g17486-like [Cucumis sativus]
          Length = 234

 Score =  149 bits (375), Expect = 3e-34
 Identities = 64/90 (71%), Positives = 80/90 (88%)
 Frame = +3

Query: 3   EPKRCPGFKFRKSIMIGKTDLGSKDIRAFMEKLAQEYVGNTYNLITKNCNHFCNDICQRL 182
           EPK CPGF +RKSI+IG+T+L  ++IR+FMEKLA+EY GNTY+LITKNCNHFCND+C RL
Sbjct: 68  EPKHCPGFTYRKSILIGRTNLSPREIRSFMEKLAEEYSGNTYHLITKNCNHFCNDVCIRL 127

Query: 183 TGSRIPRWVNRIARIGFLLDCVLPVDLSQV 272
           TG  IPRWVNR+AR+GFL +CVLPV L+++
Sbjct: 128 TGKPIPRWVNRLARLGFLCNCVLPVGLNEM 157


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