BLASTX nr result

ID: Coptis24_contig00033080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033080
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = -2

Query: 231  GGTDEVVWTVSMTWEFQLKDTYETIRRKLQPNDWHKVIWFTNHIPRHSFIGWMVMKGALK 52
            G  DE+VW  S    F +K  +E +RR  Q  +WH ++WF N +PRHSF+ WM ++  L 
Sbjct: 1182 GQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 1241

Query: 51   TLSKMY 34
            T  K+Y
Sbjct: 1242 TQDKLY 1247


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/66 (40%), Positives = 41/66 (62%)
 Frame = -2

Query: 231  GGTDEVVWTVSMTWEFQLKDTYETIRRKLQPNDWHKVIWFTNHIPRHSFIGWMVMKGALK 52
            G  DE++W  S    F +K  +E +RR  Q  +WH ++WF N +PRHSF+ WMV++  L 
Sbjct: 842  GQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 901

Query: 51   TLSKMY 34
            T  K++
Sbjct: 902  TQDKLH 907


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -2

Query: 231 GGTDEVVWTVSMTWEFQLKDTYETIRRKLQPNDWHKVIWFTNHIPRHSFIGWMVMKGALK 52
           G  DE+VW  S    F +K  +E +RR     +WH ++WF N +PRHSF+ WMV++  L 
Sbjct: 127 GQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 186

Query: 51  TLSKMY 34
           T  K++
Sbjct: 187 TQDKLH 192


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -2

Query: 231 GGTDEVVWTVSMTWEFQLKDTYETIRRKLQPNDWHKVIWFTNHIPRHSFIGWMVMKGALK 52
           G  DE+VW  S    F +K  +E +RR  Q  +WH ++WF N +PRHSF+ WM ++  L 
Sbjct: 309 GQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 368

Query: 51  TLSKMY 34
           T  K++
Sbjct: 369 TQDKLH 374


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