BLASTX nr result

ID: Coptis24_contig00033068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033068
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19895.3| unnamed protein product [Vitis vinifera]              218   4e-55
ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-...   218   4e-55
ref|XP_004136488.1| PREDICTED: receptor protein kinase CLAVATA1-...   214   8e-54
ref|XP_002307734.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002300697.1| predicted protein [Populus trichocarpa] gi|2...   212   3e-53

>emb|CBI19895.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score =  218 bits (555), Expect = 4e-55
 Identities = 109/135 (80%), Positives = 124/135 (91%), Gaps = 1/135 (0%)
 Frame = -1

Query: 523  ADFGLAKFLTD-GASEGMSSIAGSYGYIAPEYAYTLRVDEKTDVYSFGVVLLELITGRKP 347
            ADFGLAKFL D GASE MSSIAGSYGYIAPEYAYTL+VDEK+DVYSFGVVLLELI GRKP
Sbjct: 663  ADFGLAKFLQDAGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKP 722

Query: 346  VGDFEDGVDLVRWVRKTTSEISEPSDAAEVLAVVDRRLTEYPLTKVINMYRVSMLCVEET 167
            VG+F DGVD+VRWVRKTTSEIS+PSD A VLAVVD RL+ YPLT VIN+++++M+CVE+ 
Sbjct: 723  VGEFGDGVDIVRWVRKTTSEISQPSDRASVLAVVDPRLSGYPLTGVINLFKIAMMCVEDE 782

Query: 166  STSRPTMREVVHMLT 122
            S++RPTMREVVHMLT
Sbjct: 783  SSARPTMREVVHMLT 797


>ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-like [Vitis vinifera]
          Length = 984

 Score =  218 bits (555), Expect = 4e-55
 Identities = 109/135 (80%), Positives = 124/135 (91%), Gaps = 1/135 (0%)
 Frame = -1

Query: 523  ADFGLAKFLTD-GASEGMSSIAGSYGYIAPEYAYTLRVDEKTDVYSFGVVLLELITGRKP 347
            ADFGLAKFL D GASE MSSIAGSYGYIAPEYAYTL+VDEK+DVYSFGVVLLELI GRKP
Sbjct: 838  ADFGLAKFLQDAGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKP 897

Query: 346  VGDFEDGVDLVRWVRKTTSEISEPSDAAEVLAVVDRRLTEYPLTKVINMYRVSMLCVEET 167
            VG+F DGVD+VRWVRKTTSEIS+PSD A VLAVVD RL+ YPLT VIN+++++M+CVE+ 
Sbjct: 898  VGEFGDGVDIVRWVRKTTSEISQPSDRASVLAVVDPRLSGYPLTGVINLFKIAMMCVEDE 957

Query: 166  STSRPTMREVVHMLT 122
            S++RPTMREVVHMLT
Sbjct: 958  SSARPTMREVVHMLT 972


>ref|XP_004136488.1| PREDICTED: receptor protein kinase CLAVATA1-like [Cucumis sativus]
            gi|449511245|ref|XP_004163903.1| PREDICTED: receptor
            protein kinase CLAVATA1-like [Cucumis sativus]
          Length = 973

 Score =  214 bits (544), Expect = 8e-54
 Identities = 106/135 (78%), Positives = 124/135 (91%), Gaps = 1/135 (0%)
 Frame = -1

Query: 523  ADFGLAKFLTDG-ASEGMSSIAGSYGYIAPEYAYTLRVDEKTDVYSFGVVLLELITGRKP 347
            +DFGLAKFL +G ASE MSSIAGSYGYIAPEYAYTL+VDEK+DVYSFGVVLLELI GRKP
Sbjct: 827  SDFGLAKFLQNGGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKP 886

Query: 346  VGDFEDGVDLVRWVRKTTSEISEPSDAAEVLAVVDRRLTEYPLTKVINMYRVSMLCVEET 167
            VGDF +GVD+VRWV KTTSE+S+PSDAA VLAVVD RLTEYPL  VI++++++M+CVEE 
Sbjct: 887  VGDFGEGVDIVRWVLKTTSELSQPSDAASVLAVVDSRLTEYPLQAVIHLFKIAMMCVEED 946

Query: 166  STSRPTMREVVHMLT 122
            S++RPTMREVVHML+
Sbjct: 947  SSARPTMREVVHMLS 961


>ref|XP_002307734.1| predicted protein [Populus trichocarpa]
            gi|224144099|ref|XP_002336108.1| predicted protein
            [Populus trichocarpa] gi|222857183|gb|EEE94730.1|
            predicted protein [Populus trichocarpa]
            gi|222872880|gb|EEF10011.1| predicted protein [Populus
            trichocarpa]
          Length = 973

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/135 (77%), Positives = 124/135 (91%), Gaps = 1/135 (0%)
 Frame = -1

Query: 523  ADFGLAKFLTD-GASEGMSSIAGSYGYIAPEYAYTLRVDEKTDVYSFGVVLLELITGRKP 347
            ADFGLAKFL D G+SE MSS+AGSYGYIAPEYAYTL+VDEK+DVYSFGVVLLELI GRKP
Sbjct: 827  ADFGLAKFLQDAGSSECMSSVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKP 886

Query: 346  VGDFEDGVDLVRWVRKTTSEISEPSDAAEVLAVVDRRLTEYPLTKVINMYRVSMLCVEET 167
            VG+F DGVD+VRWVRKTTSE+S+PSDAA VLAVVD RL+ YPL  VI++++++MLCV++ 
Sbjct: 887  VGEFGDGVDIVRWVRKTTSELSQPSDAATVLAVVDPRLSGYPLAGVIHLFKIAMLCVKDE 946

Query: 166  STSRPTMREVVHMLT 122
            S++RPTMREVVHMLT
Sbjct: 947  SSARPTMREVVHMLT 961


>ref|XP_002300697.1| predicted protein [Populus trichocarpa] gi|222842423|gb|EEE79970.1|
            predicted protein [Populus trichocarpa]
          Length = 939

 Score =  212 bits (539), Expect = 3e-53
 Identities = 106/135 (78%), Positives = 123/135 (91%), Gaps = 1/135 (0%)
 Frame = -1

Query: 523  ADFGLAKFLTD-GASEGMSSIAGSYGYIAPEYAYTLRVDEKTDVYSFGVVLLELITGRKP 347
            ADFGLAKFL D GASE MSSIAGSYGYIAPEYAYTL+VDEK+DVYS GVVLLELI GRKP
Sbjct: 793  ADFGLAKFLQDAGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSCGVVLLELIAGRKP 852

Query: 346  VGDFEDGVDLVRWVRKTTSEISEPSDAAEVLAVVDRRLTEYPLTKVINMYRVSMLCVEET 167
            VG+F DGVD+VRWVRKTTSE+S+PSDAA VLAVVD RL+ YPLT  I++++++MLCV++ 
Sbjct: 853  VGEFGDGVDIVRWVRKTTSELSQPSDAASVLAVVDPRLSGYPLTGAIHLFKIAMLCVKDE 912

Query: 166  STSRPTMREVVHMLT 122
            S++RPTMREVVHMLT
Sbjct: 913  SSNRPTMREVVHMLT 927


Top