BLASTX nr result

ID: Coptis24_contig00033062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033062
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL14368.1| NO APICAL MERISTEM [Aquilegia coerulea]                180   3e-43
ref|XP_004146099.1| PREDICTED: protein CUP-SHAPED COTYLEDON 2-li...   114   3e-23
ref|XP_002531329.1| transcription factor, putative [Ricinus comm...   104   2e-20
emb|CBI20259.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_002282655.1| PREDICTED: protein CUP-SHAPED COTYLEDON 2 [V...   102   6e-20

>gb|ACL14368.1| NO APICAL MERISTEM [Aquilegia coerulea]
          Length = 362

 Score =  180 bits (456), Expect = 3e-43
 Identities = 104/173 (60%), Positives = 116/173 (67%), Gaps = 16/173 (9%)
 Frame = -2

Query: 680 TNLFPDVGXXXXXXXXXXXXXXPYTGPTTVDSCSYDSKTSREHVPCFSTAAAAAPTFNQQ 501
           T+LF DVG              PY+GPTTVDSCSYDSKTSREHVPCFST  AAAP FNQQ
Sbjct: 194 TSLFTDVGSPSSTSLPPLLDSSPYSGPTTVDSCSYDSKTSREHVPCFST--AAAPNFNQQ 251

Query: 500 QH--SFNLGAPSNSIINGDASM-----QFGRNDGMSGFPSLRSLQENLQFPMFFSGVAPL 342
           QH  +FN  A  N +    ASM     QFGRNDGMSG  SLRSLQENLQFP FFSGVAP+
Sbjct: 252 QHTFTFNTNAAPNPV--DAASMQQQHHQFGRNDGMSGLSSLRSLQENLQFPFFFSGVAPM 309

Query: 341 -QSISG--SDEVGMCSSGNNWM------GQEHPRVQKNRMNVVPTELDCMWTY 210
            QSIS    D  G+C+S +NWM         H +V++NRM + PTELDCMWTY
Sbjct: 310 QQSISSHHEDIGGVCNSASNWMVGHHHDQNHHQKVERNRMTLAPTELDCMWTY 362


>ref|XP_004146099.1| PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis sativus]
           gi|449507122|ref|XP_004162939.1| PREDICTED: protein
           CUP-SHAPED COTYLEDON 2-like [Cucumis sativus]
          Length = 359

 Score =  114 bits (284), Expect = 3e-23
 Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
 Frame = -2

Query: 599 TTVDSCSYDSKTSREHVPCFSTAAAAAPTFNQQQHSFNLGAPSNSIINGDASMQFGRNDG 420
           T  DSCSY+S T+REHV CFST  A   +FN   + F   +P   ++  D S +F RN G
Sbjct: 236 TDRDSCSYNSPTAREHVSCFSTTTAGG-SFNMPNYDFATPSP---LLAADPSPRFHRNIG 291

Query: 419 MSGFPSLRSLQENLQFPMFFSGV----APLQSISGSDEVGMCSSGNNWMGQEHPRVQKNR 252
           +S FPSLRSLQENLQ P F+S V     P+  ++  ++V  CSSG NW   + P+V  + 
Sbjct: 292 LSAFPSLRSLQENLQLPFFYSPVNLCSPPVPVLNNGNDVAGCSSGGNWGVSDEPKVMNS- 350

Query: 251 MNVVPTELDCMWTY 210
                TELDCMW+Y
Sbjct: 351 -----TELDCMWSY 359


>ref|XP_002531329.1| transcription factor, putative [Ricinus communis]
           gi|223529068|gb|EEF31052.1| transcription factor,
           putative [Ricinus communis]
          Length = 350

 Score =  104 bits (259), Expect = 2e-20
 Identities = 62/131 (47%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
 Frame = -2

Query: 590 DSCSYDSKTSREHVPCFSTAAAAAPTFNQQQHSFNLGAPSNSI-INGDASMQFGRNDGMS 414
           DSCS+DS +  EHV CFST AAAA      Q++F+   P  S+    D   ++ RN G+S
Sbjct: 224 DSCSFDSHSQHEHVSCFSTIAAAASAA-ANQNNFDFAPPPPSLPAMADPFGRYSRNMGVS 282

Query: 413 GFPSLRSLQENLQFPMFFSGVAPLQSISGSDEVGMCSSGNNWM-GQEHPRVQ--KNRMNV 243
            FPSLRSLQENLQ P FF   AP  +   S   G  ++  NWM G E         R+++
Sbjct: 283 AFPSLRSLQENLQLPFFFQSPAPAMATPFS---GSGTNPTNWMAGSEDGGADGGGGRVSI 339

Query: 242 VPTELDCMWTY 210
           VPTELDCMWTY
Sbjct: 340 VPTELDCMWTY 350


>emb|CBI20259.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  103 bits (258), Expect = 3e-20
 Identities = 66/147 (44%), Positives = 82/147 (55%), Gaps = 16/147 (10%)
 Frame = -2

Query: 602 PTTVDSCSYD-------SKTSREHVPCFST-----AAAAAPTFN--QQQHSFNLGAPSNS 465
           P  +DSCSYD       S    +HVP FST     AAAAA +FN   Q   F+L  PS  
Sbjct: 202 PPLLDSCSYDGGESSNNSNARDQHVPWFSTIAAAAAAAAANSFNAHHQPPPFDLAPPS-- 259

Query: 464 IINGDASMQFGRNDGMSGFPSLRSLQENLQFPMFFSGVAPLQSISG--SDEVGMCSSGNN 291
           II      +F RN  +  FP+LRSLQENL  P FFS VAP    SG  S E+G+ +S  N
Sbjct: 260 IIGSIDPSRFPRNGAVPAFPNLRSLQENLHLPFFFSQVAPPIPSSGDPSTEMGITNSAGN 319

Query: 290 WMGQEHPRVQKNRMNVVPTELDCMWTY 210
           W   E+ ++   R+ +  TELDCMW+Y
Sbjct: 320 WPAPENQKMDNGRLPMGATELDCMWSY 346


>ref|XP_002282655.1| PREDICTED: protein CUP-SHAPED COTYLEDON 2 [Vitis vinifera]
          Length = 363

 Score =  102 bits (255), Expect = 6e-20
 Identities = 71/178 (39%), Positives = 90/178 (50%), Gaps = 22/178 (12%)
 Frame = -2

Query: 677 NLFPDVGXXXXXXXXXXXXXXPYTGPTTV------DSCSYD-------SKTSREHVPCFS 537
           NL+P+V               PY G +        +SCSYD       S    +HVP FS
Sbjct: 188 NLYPEVSSPSSASLPPLLDVSPYAGTSAAAAVNDRESCSYDGGESSNNSNARDQHVPWFS 247

Query: 536 T-----AAAAAPTFN--QQQHSFNLGAPSNSIINGDASMQFGRNDGMSGFPSLRSLQENL 378
           T     AAAAA +FN   Q   F+L  PS  II      +F RN  +  FP+LRSLQENL
Sbjct: 248 TIAAAAAAAAANSFNAHHQPPPFDLAPPS--IIGSIDPSRFPRNGAVPAFPNLRSLQENL 305

Query: 377 QFPMFFSGVAPLQSISG--SDEVGMCSSGNNWMGQEHPRVQKNRMNVVPTELDCMWTY 210
             P FFS VAP    SG  S E+G+ +S  NW   E+ ++   R+ +  TELDCMW+Y
Sbjct: 306 HLPFFFSQVAPPIPSSGDPSTEMGITNSAGNWPAPENQKMDNGRLPMGATELDCMWSY 363


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