BLASTX nr result

ID: Coptis24_contig00033058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033058
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth...    96   3e-18
gb|AFW65642.1| hypothetical protein ZEAMMB73_918606 [Zea mays]         94   1e-17
dbj|BAJ86233.1| predicted protein [Hordeum vulgare subsp. vulgar...    94   1e-17
ref|XP_002441274.1| hypothetical protein SORBIDRAFT_09g023590 [S...    93   2e-17
ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [S...    93   2e-17

>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
           gi|297744088|emb|CBI37058.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +2

Query: 110 SDEGQESTSNATSGGGEAKHKEEETSWSLSYKKYGNFEQWYLEVVVSSELIEYFDIGGCY 289
           S EG+++ +NA  GGG+ K  ++ET   LSYKK  NF +WY EV V+ E+IEY+DI GCY
Sbjct: 9   SGEGKKANANA-KGGGKKKEVKKETGLGLSYKKEENFGEWYSEVCVNGEMIEYYDISGCY 67

Query: 290 ILRPLTVSIWEIMKDFFDA 346
           ILRP T+++WE M+ FFDA
Sbjct: 68  ILRPWTMAVWETMQTFFDA 86


>gb|AFW65642.1| hypothetical protein ZEAMMB73_918606 [Zea mays]
          Length = 508

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/71 (57%), Positives = 54/71 (76%)
 Frame = +2

Query: 134 SNATSGGGEAKHKEEETSWSLSYKKYGNFEQWYLEVVVSSELIEYFDIGGCYILRPLTVS 313
           S A  GGG+ K  ++ET   ++YKK  NF +WY EVVV+SE+IEY+DI GCYILRP  + 
Sbjct: 7   SAAKGGGGKKKEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAME 66

Query: 314 IWEIMKDFFDA 346
           IWE++K+FFDA
Sbjct: 67  IWELLKEFFDA 77


>dbj|BAJ86233.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326506156|dbj|BAJ91317.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 518

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/76 (53%), Positives = 55/76 (72%)
 Frame = +2

Query: 119 GQESTSNATSGGGEAKHKEEETSWSLSYKKYGNFEQWYLEVVVSSELIEYFDIGGCYILR 298
           G E T+    GG + K  ++ET   ++YKK  NF +WY EVVV+SE+IEY+DI GCYILR
Sbjct: 12  GGEKTNKGGGGGKKKKEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILR 71

Query: 299 PLTVSIWEIMKDFFDA 346
           P  + IWE++K+FFDA
Sbjct: 72  PWAMEIWELLKEFFDA 87


>ref|XP_002441274.1| hypothetical protein SORBIDRAFT_09g023590 [Sorghum bicolor]
           gi|241946559|gb|EES19704.1| hypothetical protein
           SORBIDRAFT_09g023590 [Sorghum bicolor]
          Length = 508

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/69 (57%), Positives = 53/69 (76%)
 Frame = +2

Query: 140 ATSGGGEAKHKEEETSWSLSYKKYGNFEQWYLEVVVSSELIEYFDIGGCYILRPLTVSIW 319
           A  GGG+ K  ++ET   ++YKK  NF +WY EVVV+SE+IEY+DI GCYILRP  + IW
Sbjct: 9   AKGGGGKKKEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIW 68

Query: 320 EIMKDFFDA 346
           E++K+FFDA
Sbjct: 69  ELLKEFFDA 77


>ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
           gi|241942103|gb|EES15248.1| hypothetical protein
           SORBIDRAFT_07g025100 [Sorghum bicolor]
          Length = 508

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/69 (57%), Positives = 53/69 (76%)
 Frame = +2

Query: 140 ATSGGGEAKHKEEETSWSLSYKKYGNFEQWYLEVVVSSELIEYFDIGGCYILRPLTVSIW 319
           A  GGG+ K  ++ET   ++YKK  NF +WY EVVV+SE+IEY+DI GCYILRP  + IW
Sbjct: 9   AKGGGGKKKEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIW 68

Query: 320 EIMKDFFDA 346
           E++K+FFDA
Sbjct: 69  ELLKEFFDA 77


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