BLASTX nr result

ID: Coptis24_contig00033053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033053
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63520.1| DnaJ protein, putative [Arabidopsis thaliana]           91   8e-17
ref|NP_565034.1| chaperone DnaJ-domain containing protein [Arabi...    90   2e-16
ref|ZP_03544762.1| chaperone protein DnaJ [Comamonas testosteron...    66   3e-09
ref|ZP_13096525.1| chaperone protein DnaJ [Comamonas testosteron...    65   8e-09
ref|YP_003277052.1| molecular chaperone DnaJ [Comamonas testoste...    63   2e-08

>gb|AAM63520.1| DnaJ protein, putative [Arabidopsis thaliana]
          Length = 126

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = -2

Query: 454 RGVSFQTRSL--PISDAFAVLGLTPFASKSDVKHAYKRLALKFHPDVIKGDNVNEKQETF 281
           R + F TR    P    + VLGLTP AS+++VK A+KRLALK+HPDV KG     + + F
Sbjct: 24  RLIRFPTRCCLSPDLSHYTVLGLTPLASQTEVKRAFKRLALKYHPDVHKG-----QDKDF 78

Query: 280 KEIKSAYESLMEKFEVEEELLTTDGXXXXXXXXXWMGFEGGIP 152
           KEIKSAYE LM+KFE EEE +             WMGFEGGIP
Sbjct: 79  KEIKSAYECLMQKFEKEEEEMEITEMGEIDEWEEWMGFEGGIP 121


>ref|NP_565034.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]
           gi|332197149|gb|AEE35270.1| chaperone DnaJ-domain
           containing protein [Arabidopsis thaliana]
          Length = 126

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/103 (51%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = -2

Query: 454 RGVSFQTRSL--PISDAFAVLGLTPFASKSDVKHAYKRLALKFHPDVIKGDNVNEKQETF 281
           R + F TR    P    + VLGLTP AS+++VK A+KRLALK+HPDV KG     + + F
Sbjct: 24  RLIQFPTRCCLSPDLSHYTVLGLTPLASQTEVKRAFKRLALKYHPDVHKG-----QDKDF 78

Query: 280 KEIKSAYESLMEKFEVEEELLTTDGXXXXXXXXXWMGFEGGIP 152
           KEIKSAYE LM+KF+ EEE +             WMGFEGGIP
Sbjct: 79  KEIKSAYECLMQKFKKEEEEMEITEMGEIDEWEEWMGFEGGIP 121


>ref|ZP_03544762.1| chaperone protein DnaJ [Comamonas testosteroni KF-1]
           gi|220713680|gb|EED69048.1| chaperone protein DnaJ
           [Comamonas testosteroni KF-1]
          Length = 376

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = -2

Query: 415 DAFAVLGLTPFASKSDVKHAYKRLALKFHPDVIKGDNVNEKQETFKEIKSAYESLME 245
           D + VLG+   AS  D+K AY++LA+K+HPD  +GD   E +ETFKE+K AYE L +
Sbjct: 5   DYYEVLGVAKSASDDDIKKAYRKLAMKYHPDRNQGDKAKEAEETFKEVKEAYEMLSD 61


>ref|ZP_13096525.1| chaperone protein DnaJ [Comamonas testosteroni ATCC 11996]
           gi|371452321|gb|EHN65350.1| chaperone protein DnaJ
           [Comamonas testosteroni ATCC 11996]
          Length = 377

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -2

Query: 415 DAFAVLGLTPFASKSDVKHAYKRLALKFHPDVIKGDNVNEKQETFKEIKSAYESLME 245
           D + VLG+   AS  D+K AY++LA+KFHPD  +GD   E +E FKE+K AYE L +
Sbjct: 5   DYYEVLGVAKSASDDDIKKAYRKLAMKFHPDRNQGDKAKEAEEKFKEVKEAYEMLSD 61


>ref|YP_003277052.1| molecular chaperone DnaJ [Comamonas testosteroni CNB-2]
           gi|299530689|ref|ZP_07044104.1| chaperone protein DnaJ
           [Comamonas testosteroni S44] gi|262207658|gb|ACY31756.1|
           chaperone protein DnaJ [Comamonas testosteroni CNB-2]
           gi|298721205|gb|EFI62147.1| chaperone protein DnaJ
           [Comamonas testosteroni S44]
          Length = 376

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = -2

Query: 415 DAFAVLGLTPFASKSDVKHAYKRLALKFHPDVIKGDNVNEKQETFKEIKSAYESLME 245
           D + VLG+   AS  D+K AY++LA+KFHPD  +G+   E +E FKE+K AYE L +
Sbjct: 5   DYYEVLGVAKSASDDDIKKAYRKLAMKFHPDRNQGEKAKEAEEKFKEVKEAYEMLSD 61


Top