BLASTX nr result
ID: Coptis24_contig00033051
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033051 (462 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate re... 65 4e-09 emb|CBI23997.3| unnamed protein product [Vitis vinifera] 62 4e-08 ref|XP_001762626.1| predicted protein [Physcomitrella patens sub... 62 4e-08 emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera] 62 4e-08 ref|XP_002268958.2| PREDICTED: glutamate receptor 2.7-like [Viti... 61 8e-08 >ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.9-like [Glycine max] Length = 823 Score = 65.5 bits (158), Expect = 4e-09 Identities = 29/66 (43%), Positives = 41/66 (62%) Frame = -2 Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVL 282 VTI AKRS VDF+ P++ G+AMLV +++ IF PF W +W T+GA FI Sbjct: 446 VTIVAKRSEYVDFTMPFSESGVAMLVLAKHDERQNIWIFLKPFNWDLWLTTGAAFIFTGF 505 Query: 281 LRWYFQ 264 + W+F+ Sbjct: 506 IVWFFE 511 >emb|CBI23997.3| unnamed protein product [Vitis vinifera] Length = 1316 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/65 (43%), Positives = 37/65 (56%) Frame = -2 Query: 458 TITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 279 TI A RS VDF+ PYT G++M+VP KS IF P TWG+W TS F+ + + Sbjct: 903 TIVANRSNYVDFTLPYTESGVSMIVPIKDNKSKRAWIFLKPLTWGLWVTSACFFVFIGFV 962 Query: 278 RWYFQ 264 W + Sbjct: 963 IWVLE 967 Score = 58.5 bits (140), Expect = 5e-07 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Frame = -2 Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVP--NAYEKSNMFMIFFAPFTWGVWFTSGALFISM 288 +TI A RSL VDF+ PYT G++M+VP + KS +F P TW +W TS F+ + Sbjct: 462 ITILASRSLYVDFTLPYTESGVSMIVPIIDNRSKSVGAWVFLKPLTWDLWVTSACFFVFI 521 Query: 287 VLLRW 273 L+ W Sbjct: 522 GLVIW 526 >ref|XP_001762626.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686034|gb|EDQ72425.1| predicted protein [Physcomitrella patens subsp. patens] Length = 865 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/66 (42%), Positives = 41/66 (62%) Frame = -2 Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVL 282 VTIT KRS+SVDF++P+T G+ ++VP +N F PFT +W T+GA F L Sbjct: 537 VTITTKRSMSVDFTQPFTTSGLVVVVPVKQSNANYAWAFLRPFTPLMWLTTGAFFFFTGL 596 Query: 281 LRWYFQ 264 + W+ + Sbjct: 597 VVWFLE 602 >emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera] Length = 960 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/65 (43%), Positives = 37/65 (56%) Frame = -2 Query: 458 TITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 279 TI A RS VDF+ PYT G++M+VP KS IF P TWG+W TS F+ + + Sbjct: 547 TIVANRSNYVDFTLPYTESGVSMIVPIKDNKSKSAWIFLKPLTWGLWVTSACFFVFIGFV 606 Query: 278 RWYFQ 264 W + Sbjct: 607 IWVLE 611 >ref|XP_002268958.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera] Length = 1001 Score = 61.2 bits (147), Expect = 8e-08 Identities = 26/66 (39%), Positives = 38/66 (57%) Frame = -2 Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVL 282 +TI A RSL VDF+ PYT G++M+VP E+ +F P TW +W TS F+ + Sbjct: 536 ITILANRSLYVDFTLPYTESGVSMVVPTIDERKENAWVFLKPLTWDLWVTSFCFFVFIGF 595 Query: 281 LRWYFQ 264 + W + Sbjct: 596 VIWVLE 601