BLASTX nr result

ID: Coptis24_contig00033051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033051
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate re...    65   4e-09
emb|CBI23997.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_001762626.1| predicted protein [Physcomitrella patens sub...    62   4e-08
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]    62   4e-08
ref|XP_002268958.2| PREDICTED: glutamate receptor 2.7-like [Viti...    61   8e-08

>ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.9-like
           [Glycine max]
          Length = 823

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = -2

Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVL 282
           VTI AKRS  VDF+ P++  G+AMLV   +++     IF  PF W +W T+GA FI    
Sbjct: 446 VTIVAKRSEYVDFTMPFSESGVAMLVLAKHDERQNIWIFLKPFNWDLWLTTGAAFIFTGF 505

Query: 281 LRWYFQ 264
           + W+F+
Sbjct: 506 IVWFFE 511


>emb|CBI23997.3| unnamed protein product [Vitis vinifera]
          Length = 1316

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = -2

Query: 458  TITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 279
            TI A RS  VDF+ PYT  G++M+VP    KS    IF  P TWG+W TS   F+ +  +
Sbjct: 903  TIVANRSNYVDFTLPYTESGVSMIVPIKDNKSKRAWIFLKPLTWGLWVTSACFFVFIGFV 962

Query: 278  RWYFQ 264
             W  +
Sbjct: 963  IWVLE 967



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = -2

Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVP--NAYEKSNMFMIFFAPFTWGVWFTSGALFISM 288
           +TI A RSL VDF+ PYT  G++M+VP  +   KS    +F  P TW +W TS   F+ +
Sbjct: 462 ITILASRSLYVDFTLPYTESGVSMIVPIIDNRSKSVGAWVFLKPLTWDLWVTSACFFVFI 521

Query: 287 VLLRW 273
            L+ W
Sbjct: 522 GLVIW 526


>ref|XP_001762626.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162686034|gb|EDQ72425.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 865

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = -2

Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVL 282
           VTIT KRS+SVDF++P+T  G+ ++VP     +N    F  PFT  +W T+GA F    L
Sbjct: 537 VTITTKRSMSVDFTQPFTTSGLVVVVPVKQSNANYAWAFLRPFTPLMWLTTGAFFFFTGL 596

Query: 281 LRWYFQ 264
           + W+ +
Sbjct: 597 VVWFLE 602


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = -2

Query: 458 TITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVLL 279
           TI A RS  VDF+ PYT  G++M+VP    KS    IF  P TWG+W TS   F+ +  +
Sbjct: 547 TIVANRSNYVDFTLPYTESGVSMIVPIKDNKSKSAWIFLKPLTWGLWVTSACFFVFIGFV 606

Query: 278 RWYFQ 264
            W  +
Sbjct: 607 IWVLE 611


>ref|XP_002268958.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 1001

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/66 (39%), Positives = 38/66 (57%)
 Frame = -2

Query: 461 VTITAKRSLSVDFSRPYTNGGIAMLVPNAYEKSNMFMIFFAPFTWGVWFTSGALFISMVL 282
           +TI A RSL VDF+ PYT  G++M+VP   E+     +F  P TW +W TS   F+ +  
Sbjct: 536 ITILANRSLYVDFTLPYTESGVSMVVPTIDERKENAWVFLKPLTWDLWVTSFCFFVFIGF 595

Query: 281 LRWYFQ 264
           + W  +
Sbjct: 596 VIWVLE 601


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