BLASTX nr result

ID: Coptis24_contig00033050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033050
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336567.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002298693.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
emb|CAN79489.1| hypothetical protein VITISV_033370 [Vitis vinifera]    82   6e-14
emb|CAN64955.1| hypothetical protein VITISV_029829 [Vitis vinifera]    76   3e-12

>ref|XP_002336567.1| predicted protein [Populus trichocarpa] gi|222836203|gb|EEE74624.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/92 (45%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
 Frame = -3

Query: 423 RQGELSLIAYFNAL-SKWEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 247
           +QG + +I Y+N + S W E+D+Y+D+   C+ D+  LK+  ER RI+ FLAGLN  F+ 
Sbjct: 3   KQGNMMVIEYYNTMKSFWLELDYYQDFKMQCSDDVVILKNYVERERIFEFLAGLNIEFDQ 62

Query: 246 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAM 151
            RVQILG++  P SL EV+  I+ ++ RRT M
Sbjct: 63  MRVQILGKESLP-SLNEVFLVIRAKEGRRTVM 93


>ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|222873215|gb|EEF10346.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = -3

Query: 423 RQGELSLIAYFNAL-SKWEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 247
           +QG + +I Y+N + S W E+D+Y+D+   C+ D   LK+  ER RI+ FLAGLN  F+ 
Sbjct: 124 KQGNMMVIEYYNIMKSFWLELDYYQDFKMQCSEDAVILKNYVERERIFEFLAGLNIEFDQ 183

Query: 246 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAMRVREENLEIP 121
            RVQILG++  P SL +V++ I+ E+ RRT M      LE+P
Sbjct: 184 MRVQILGKESMP-SLNKVFSVIRAEEGRRTVM------LEVP 218


>ref|XP_002298693.1| predicted protein [Populus trichocarpa] gi|222845951|gb|EEE83498.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = -3

Query: 438 LSFTIRQGELSLIAYFNAL-SKWEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLN 262
           LS T +Q  + +I Y+N + S W E+D+Y+D+   C  D   LK+  ER RI+ FLAGLN
Sbjct: 104 LSMT-KQDNMMVIEYYNTMKSFWLELDYYQDFKMQCNDDAVILKNYVERERIFEFLAGLN 162

Query: 261 SSFEYARVQILGRQPAPTSLAEVYAYIQGEDSRRTAM 151
             F+  RVQILG++  P SL EV++ I+ E+ RRT M
Sbjct: 163 IEFDQMRVQILGKESLP-SLNEVFSVIRAEEGRRTVM 198


>emb|CAN79489.1| hypothetical protein VITISV_033370 [Vitis vinifera]
          Length = 747

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = -3

Query: 423 RQGELSLIAYFNAL-SKWEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 247
           +QG  S+  Y+N L S W E+DHY+    V A D   LK   E+ R++ FLAGLN   + 
Sbjct: 46  KQGSWSITKYYNKLQSLWLELDHYQHIEMVVAEDTTRLKKIMEQERVFEFLAGLNPELDQ 105

Query: 246 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAM 151
            RVQ LG++P P S+ EVYAY+ GE+S R  +
Sbjct: 106 VRVQKLGKEPLP-SIREVYAYVIGEESHRDTL 136


>emb|CAN64955.1| hypothetical protein VITISV_029829 [Vitis vinifera]
          Length = 1368

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = -3

Query: 423 RQGELSLIAYFNALSK-WEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 247
           +QG  ++  Y N L+  W+E+DHY      C  D A LK   E+ R+Y FL GLN  F+ 
Sbjct: 92  KQGSKTVTEYANQLNALWQELDHYRVIKTKCPEDAAILKDFIEQDRVYDFLVGLNPEFDQ 151

Query: 246 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAM 151
            R+QILG+Q  P    EV A I+G++SRR+ M
Sbjct: 152 VRIQILGKQEVP-CFNEVXALIRGKESRRSVM 182


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