BLASTX nr result

ID: Coptis24_contig00033039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033039
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15...   124   8e-27
ref|XP_002530433.1| phosphatidylinositol n-acetylglucosaminyltra...   114   1e-23
ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C...   113   2e-23
ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [C...   113   2e-23
ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23

>ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera]
           gi|297737975|emb|CBI27176.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = -3

Query: 216 IVDLTNKVHQLPCCIKHNGPCTVSHYFKPSKTGVDVEGLSVEEACFRGRKLQGAKITIPE 37
           +VDLT  +HQLPCCIK+NGPC+VSHYFKP  TG++VEGL VEEA FRGRKLQG  I +PE
Sbjct: 25  VVDLTGHIHQLPCCIKYNGPCSVSHYFKPKHTGIEVEGLKVEEAFFRGRKLQGTTIHLPE 84

Query: 36  GYSGFVLGKKKS 1
           GYSGFVLGKK S
Sbjct: 85  GYSGFVLGKKSS 96


>ref|XP_002530433.1| phosphatidylinositol n-acetylglucosaminyltransferase subunit p,
           putative [Ricinus communis] gi|223530019|gb|EEF31943.1|
           phosphatidylinositol n-acetylglucosaminyltransferase
           subunit p, putative [Ricinus communis]
          Length = 163

 Score =  114 bits (284), Expect = 1e-23
 Identities = 47/76 (61%), Positives = 64/76 (84%)
 Frame = -3

Query: 228 SSSEIVDLTNKVHQLPCCIKHNGPCTVSHYFKPSKTGVDVEGLSVEEACFRGRKLQGAKI 49
           +  E+ +L+ ++H+LPCCIK++GPC VSHYFKP+ TGV+ EGL +EE+ FRGRKLQGA +
Sbjct: 20  NQDEVTNLSGQIHRLPCCIKYDGPCAVSHYFKPNPTGVESEGLIIEESYFRGRKLQGATV 79

Query: 48  TIPEGYSGFVLGKKKS 1
            +P GYSGFV+GKKK+
Sbjct: 80  PLPPGYSGFVIGKKKN 95


>ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 164

 Score =  113 bits (282), Expect = 2e-23
 Identities = 49/69 (71%), Positives = 61/69 (88%)
 Frame = -3

Query: 213 VDLTNKVHQLPCCIKHNGPCTVSHYFKPSKTGVDVEGLSVEEACFRGRKLQGAKITIPEG 34
           +D++ KVHQLPC IK +GPC VSHYFKP  TG++V+GL++EEA FRGRKLQGA I++PEG
Sbjct: 26  LDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATISLPEG 85

Query: 33  YSGFVLGKK 7
           YSG+VLGKK
Sbjct: 86  YSGYVLGKK 94


>ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 169

 Score =  113 bits (282), Expect = 2e-23
 Identities = 49/69 (71%), Positives = 61/69 (88%)
 Frame = -3

Query: 213 VDLTNKVHQLPCCIKHNGPCTVSHYFKPSKTGVDVEGLSVEEACFRGRKLQGAKITIPEG 34
           +D++ KVHQLPC IK +GPC VSHYFKP  TG++V+GL++EEA FRGRKLQGA I++PEG
Sbjct: 31  LDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATISLPEG 90

Query: 33  YSGFVLGKK 7
           YSG+VLGKK
Sbjct: 91  YSGYVLGKK 99


>ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/74 (68%), Positives = 60/74 (81%)
 Frame = -3

Query: 228 SSSEIVDLTNKVHQLPCCIKHNGPCTVSHYFKPSKTGVDVEGLSVEEACFRGRKLQGAKI 49
           S +E+ +LT KVH LPCCIK++GP  VSHYFKP  TGV+VE + VEEA FRGRKLQGA +
Sbjct: 20  SETEVPNLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGATL 79

Query: 48  TIPEGYSGFVLGKK 7
            IP GYSGFV+GKK
Sbjct: 80  AIPNGYSGFVIGKK 93


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