BLASTX nr result

ID: Coptis24_contig00033036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033036
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11
ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
emb|CBI29146.3| unnamed protein product [Vitis vinifera]               73   7e-11
ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255...    73   7e-11
emb|CAN81742.1| hypothetical protein VITISV_040850 [Vitis vinifera]    73   7e-11

>ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|222865500|gb|EEF02631.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
 Frame = +2

Query: 14  NSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNVTYSRASQDRLLRFSFAHEPKED- 190
           NS     +E  S  SH  S L A G+ ++   D   +  S     +  +FSFA +P +  
Sbjct: 454 NSFTTNKQELVSAHSHSASVLSATGSSKEPTLDEVILNSSETPYSQRFQFSFARKPNDSI 513

Query: 191 KIRHEMGNYIKMFQKEIQK-GDDCRVARPRHYDEDYYDFSLPDETLLFDKVVFRNRIESG 367
           +++ ++  Y+K F+K+++K G + ++ R  H+D D Y+     +  LFD V   NRI+SG
Sbjct: 514 EVQQDIRKYVKSFEKDMEKTGVNSKILRSNHFDLDEYNSQASRQNFLFDTVFLNNRIQSG 573

Query: 368 VFLLCGN*GMSM*IRFSPF 424
             LLC      M + FSPF
Sbjct: 574 SMLLCDG---GMGVSFSPF 589


>ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|222851742|gb|EEE89289.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
 Frame = +2

Query: 2   NRLMNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNVTYSRASQDRLLRFSFAHEP 181
           N  +NS     +E     SH  S L   G+ Q+   +   +  S     R L+FSFA +P
Sbjct: 443 NCYLNSFATSKQELVGTHSHGASVLSTTGSCQEPALEEVTLNSSETPDSRRLQFSFAQKP 502

Query: 182 KED-KIRHEMGNYIKMFQKEIQKGD-DCRVARPRHYDEDYYDFSLPDETLLFDKVVFRNR 355
            +  +++ ++  Y+K F+K+ +K   + ++ R  H+D D Y+     +  LFD V   NR
Sbjct: 503 NDSIELQQDIRKYVKSFEKDTEKPSINSKILRSNHFDLDEYNLQASRQNFLFDTVFLNNR 562

Query: 356 IESGVFLLCGN*GMSM*IRFSPF 424
           I+SG  LLC      M + FSPF
Sbjct: 563 IQSGSVLLCDG---GMGVSFSPF 582


>emb|CBI29146.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = +2

Query: 11  MNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNVTYSRASQDRLLRFSFAHEPKE- 187
           +N  +E     QS ++H+DS L    +  +   + D +  +     +  +FS + +P   
Sbjct: 444 LNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGLNGAIGKHGQKFQFSISRKPSGI 503

Query: 188 DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYDFSLPDETLLFDKVVFRNRIESG 367
              + ++ NY+K F+K+   G + +  R  +YD D Y+   P + LLFD+V ++NRIESG
Sbjct: 504 SGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYNLKNPAQNLLFDRVFYKNRIESG 560

Query: 368 VFLLCG 385
             LLCG
Sbjct: 561 SLLLCG 566


>ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255666 [Vitis vinifera]
          Length = 586

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = +2

Query: 11  MNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNVTYSRASQDRLLRFSFAHEPKE- 187
           +N  +E     QS ++H+DS L    +  +   + D +  +     +  +FS + +P   
Sbjct: 450 LNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGLNGAIGKHGQKFQFSISRKPSGI 509

Query: 188 DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYDFSLPDETLLFDKVVFRNRIESG 367
              + ++ NY+K F+K+   G + +  R  +YD D Y+   P + LLFD+V ++NRIESG
Sbjct: 510 SGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYNLKNPAQNLLFDRVFYKNRIESG 566

Query: 368 VFLLCG 385
             LLCG
Sbjct: 567 SLLLCG 572


>emb|CAN81742.1| hypothetical protein VITISV_040850 [Vitis vinifera]
          Length = 724

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
 Frame = +2

Query: 11  MNSNKELDEESQSMLSHDDSALLAKGNRQDFLKDNDNVTYSRASQDRLLRFSFAHEPKE- 187
           +N  +E     QS ++H+DS L    +  +   + D +  +     +  +FS + +P   
Sbjct: 588 LNPKQESSTRGQSSITHEDSCLTMNRSSNEAAINEDGLNGAIGKHGQKFQFSISRKPSGI 647

Query: 188 DKIRHEMGNYIKMFQKEIQKGDDCRVARPRHYDEDYYDFSLPDETLLFDKVVFRNRIESG 367
              + ++ NY+K F+K+   G + +  R  +YD D Y+   P + LLFD+V ++NRIESG
Sbjct: 648 SGFQQDIRNYVKRFEKD---GGNQQRMRSNYYDIDDYNLKNPAQNLLFDRVFYKNRIESG 704

Query: 368 VFLLCG 385
             LLCG
Sbjct: 705 SLLLCG 710


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