BLASTX nr result
ID: Coptis24_contig00033009
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033009 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [... 103 2e-20 ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|2... 103 2e-20 ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [... 102 2e-20 emb|CBI34640.3| unnamed protein product [Vitis vinifera] 100 1e-19 ref|XP_002270961.1| PREDICTED: auxin-induced protein 5NG4 [Vitis... 100 1e-19 >ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max] Length = 374 Score = 103 bits (256), Expect = 2e-20 Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 2/93 (2%) Frame = -2 Query: 275 AMLCVGGALLLTFYKGIPLTHLSHSRAASN--SKFHVNVSDSHEKTHRWIIGSIALFAGS 102 +++C+GGAL+LT YKG PL + SH + S VN++ S T +W IG IAL G+ Sbjct: 140 SLVCIGGALMLTLYKGKPLFNFSHYESVSPVAKSSEVNLA-STRTTGKWTIGVIALALGT 198 Query: 101 AFWSSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3 FWSSW+++Q+KISKR+PCQY+STAIM+FFG + Sbjct: 199 IFWSSWFILQSKISKRYPCQYSSTAIMSFFGAI 231 >ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|222844413|gb|EEE81960.1| predicted protein [Populus trichocarpa] Length = 364 Score = 103 bits (256), Expect = 2e-20 Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 1/92 (1%) Frame = -2 Query: 275 AMLCVGGALLLTFYKGIPLTHLSHSRAASNSKF-HVNVSDSHEKTHRWIIGSIALFAGSA 99 A++C+GGA+LL FYKGIPLT+ SHSRAA+ H + S +K RW++GSI AG Sbjct: 139 ALICMGGAVLLIFYKGIPLTN-SHSRAATTDILNHADTMISGKKRQRWVVGSILSLAGCF 197 Query: 98 FWSSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3 WS W+LIQAKISK +P QY+STA+M+F G + Sbjct: 198 TWSLWFLIQAKISKSYPFQYSSTALMSFLGAV 229 >ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max] Length = 374 Score = 102 bits (255), Expect = 2e-20 Identities = 48/93 (51%), Positives = 69/93 (74%), Gaps = 2/93 (2%) Frame = -2 Query: 275 AMLCVGGALLLTFYKGIPLTHLSHSRAASN--SKFHVNVSDSHEKTHRWIIGSIALFAGS 102 +++C+GGAL+LT YKG PL + SH + S + VN++ + K +W IG IAL G+ Sbjct: 140 SLVCIGGALMLTLYKGKPLFNFSHYESVSPVANSSAVNLASTRTKG-KWTIGVIALVLGT 198 Query: 101 AFWSSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3 FWSSW+++Q+KISKR+PCQY+STAIM+FFG + Sbjct: 199 IFWSSWFILQSKISKRYPCQYSSTAIMSFFGAI 231 >emb|CBI34640.3| unnamed protein product [Vitis vinifera] Length = 748 Score = 100 bits (249), Expect = 1e-19 Identities = 45/90 (50%), Positives = 61/90 (67%) Frame = -2 Query: 272 MLCVGGALLLTFYKGIPLTHLSHSRAASNSKFHVNVSDSHEKTHRWIIGSIALFAGSAFW 93 ++C+ GA++LT YKG+PL S A S + S +KT RW +GSIAL G+ W Sbjct: 523 LVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGKKTERWTVGSIALMGGTLLW 582 Query: 92 SSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3 SSW+LIQ+ I K +PCQY+STAIM+FFG + Sbjct: 583 SSWFLIQSNIGKLYPCQYSSTAIMSFFGAI 612 >ref|XP_002270961.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] Length = 368 Score = 100 bits (249), Expect = 1e-19 Identities = 45/90 (50%), Positives = 61/90 (67%) Frame = -2 Query: 272 MLCVGGALLLTFYKGIPLTHLSHSRAASNSKFHVNVSDSHEKTHRWIIGSIALFAGSAFW 93 ++C+ GA++LT YKG+PL S A S + S +KT RW +GSIAL G+ W Sbjct: 143 LVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGKKTERWTVGSIALMGGTLLW 202 Query: 92 SSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3 SSW+LIQ+ I K +PCQY+STAIM+FFG + Sbjct: 203 SSWFLIQSNIGKLYPCQYSSTAIMSFFGAI 232