BLASTX nr result

ID: Coptis24_contig00033009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033009
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [...   103   2e-20
ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [...   102   2e-20
emb|CBI34640.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002270961.1| PREDICTED: auxin-induced protein 5NG4 [Vitis...   100   1e-19

>ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 374

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
 Frame = -2

Query: 275 AMLCVGGALLLTFYKGIPLTHLSHSRAASN--SKFHVNVSDSHEKTHRWIIGSIALFAGS 102
           +++C+GGAL+LT YKG PL + SH  + S       VN++ S   T +W IG IAL  G+
Sbjct: 140 SLVCIGGALMLTLYKGKPLFNFSHYESVSPVAKSSEVNLA-STRTTGKWTIGVIALALGT 198

Query: 101 AFWSSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3
            FWSSW+++Q+KISKR+PCQY+STAIM+FFG +
Sbjct: 199 IFWSSWFILQSKISKRYPCQYSSTAIMSFFGAI 231


>ref|XP_002302687.1| predicted protein [Populus trichocarpa] gi|222844413|gb|EEE81960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
 Frame = -2

Query: 275 AMLCVGGALLLTFYKGIPLTHLSHSRAASNSKF-HVNVSDSHEKTHRWIIGSIALFAGSA 99
           A++C+GGA+LL FYKGIPLT+ SHSRAA+     H +   S +K  RW++GSI   AG  
Sbjct: 139 ALICMGGAVLLIFYKGIPLTN-SHSRAATTDILNHADTMISGKKRQRWVVGSILSLAGCF 197

Query: 98  FWSSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3
            WS W+LIQAKISK +P QY+STA+M+F G +
Sbjct: 198 TWSLWFLIQAKISKSYPFQYSSTALMSFLGAV 229


>ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 374

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/93 (51%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = -2

Query: 275 AMLCVGGALLLTFYKGIPLTHLSHSRAASN--SKFHVNVSDSHEKTHRWIIGSIALFAGS 102
           +++C+GGAL+LT YKG PL + SH  + S   +   VN++ +  K  +W IG IAL  G+
Sbjct: 140 SLVCIGGALMLTLYKGKPLFNFSHYESVSPVANSSAVNLASTRTKG-KWTIGVIALVLGT 198

Query: 101 AFWSSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3
            FWSSW+++Q+KISKR+PCQY+STAIM+FFG +
Sbjct: 199 IFWSSWFILQSKISKRYPCQYSSTAIMSFFGAI 231


>emb|CBI34640.3| unnamed protein product [Vitis vinifera]
          Length = 748

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/90 (50%), Positives = 61/90 (67%)
 Frame = -2

Query: 272 MLCVGGALLLTFYKGIPLTHLSHSRAASNSKFHVNVSDSHEKTHRWIIGSIALFAGSAFW 93
           ++C+ GA++LT YKG+PL   S   A S +        S +KT RW +GSIAL  G+  W
Sbjct: 523 LVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGKKTERWTVGSIALMGGTLLW 582

Query: 92  SSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3
           SSW+LIQ+ I K +PCQY+STAIM+FFG +
Sbjct: 583 SSWFLIQSNIGKLYPCQYSSTAIMSFFGAI 612


>ref|XP_002270961.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 368

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/90 (50%), Positives = 61/90 (67%)
 Frame = -2

Query: 272 MLCVGGALLLTFYKGIPLTHLSHSRAASNSKFHVNVSDSHEKTHRWIIGSIALFAGSAFW 93
           ++C+ GA++LT YKG+PL   S   A S +        S +KT RW +GSIAL  G+  W
Sbjct: 143 LVCICGAMILTLYKGMPLVKYSRPEAPSPTMDQAISLSSGKKTERWTVGSIALMGGTLLW 202

Query: 92  SSWYLIQAKISKRFPCQYTSTAIMNFFGTL 3
           SSW+LIQ+ I K +PCQY+STAIM+FFG +
Sbjct: 203 SSWFLIQSNIGKLYPCQYSSTAIMSFFGAI 232


Top