BLASTX nr result

ID: Coptis24_contig00033007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033007
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, par...    55   6e-06
ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    55   6e-06

>ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, partial [Cucumis sativus]
          Length = 345

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +3

Query: 165 RRRGPAKCSDCRIEATESIDRLEVTFNERGQPINEESVKMVSLLGSLAREKVDITINDWR 344
           +RRGP K     IE    +D   +TF++ GQPI E S+ + S LG+L RE V +T+++WR
Sbjct: 139 KRRGPTKMKPIAIEECNKVD---ITFDQFGQPIGEASIGLSSFLGALVREVVPVTLSNWR 195


>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +3

Query: 165 RRRGPAKCSDCRIEATESIDRLEVTFNERGQPINEESVKMVSLLGSLAREKVDITINDWR 344
           +RRGP K     IE     +++ VTF++ GQPI E S+ + S LG+L RE V +T++DWR
Sbjct: 139 KRRGPTKTKPIAIE---ECNKVGVTFDQFGQPIEEASIGLSSFLGALVREVVPVTLSDWR 195



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +3

Query: 165 RRRGPAKCSDCRIEATESIDRLEVTFNERGQPINEESVKMVSLLGSLAREKVDITINDWR 344
           +RRGP K     IE    +D   +TF++ GQPI E S+ + S LG+L RE V +T+++WR
Sbjct: 448 KRRGPTKMKPIAIEECNKVD---ITFDQFGQPIGEASIGLSSFLGALVREVVPVTLSNWR 504


Top