BLASTX nr result

ID: Coptis24_contig00032984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032984
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261...   126   2e-27
emb|CBI21012.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454...    83   3e-14
ref|XP_002324849.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera]
          Length = 1001

 Score =  126 bits (316), Expect = 2e-27
 Identities = 72/135 (53%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
 Frame = -1

Query: 402 SPIKPVKAAHVAQGFPELSIPTPPPVFTSPRLNPHPETNFLKRSKYSHSSNAALSLEHEH 223
           SPIKPVKAAHVAQ FP L   +PP VFTSPR+NPH ET+FLKR++  H   +        
Sbjct: 63  SPIKPVKAAHVAQEFPGLC--SPPLVFTSPRINPHHETSFLKRTQCHHVQFST----DNG 116

Query: 222 RRNTVVVGSDGSERSSRKLMVGLVPCIRKACDSKDSVQVQPCSPSGCVDEYLADSVEV-G 46
           R   V   S+ S+ ++ +L  GLV  + K CD KDSVQ QPCS SGCVDEYLAD++E   
Sbjct: 117 RGKKVAAVSNISDNANAQLNTGLVAKVEKECDIKDSVQDQPCSSSGCVDEYLADTMEADS 176

Query: 45  CDSSDSANLCLNQAD 1
             S+ SA  CLNQ++
Sbjct: 177 AISAHSAGSCLNQSN 191


>emb|CBI21012.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score =  126 bits (316), Expect = 2e-27
 Identities = 72/135 (53%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
 Frame = -1

Query: 402 SPIKPVKAAHVAQGFPELSIPTPPPVFTSPRLNPHPETNFLKRSKYSHSSNAALSLEHEH 223
           SPIKPVKAAHVAQ FP L   +PP VFTSPR+NPH ET+FLKR++  H   +        
Sbjct: 75  SPIKPVKAAHVAQEFPGLC--SPPLVFTSPRINPHHETSFLKRTQCHHVQFST----DNG 128

Query: 222 RRNTVVVGSDGSERSSRKLMVGLVPCIRKACDSKDSVQVQPCSPSGCVDEYLADSVEV-G 46
           R   V   S+ S+ ++ +L  GLV  + K CD KDSVQ QPCS SGCVDEYLAD++E   
Sbjct: 129 RGKKVAAVSNISDNANAQLNTGLVAKVEKECDIKDSVQDQPCSSSGCVDEYLADTMEADS 188

Query: 45  CDSSDSANLCLNQAD 1
             S+ SA  CLNQ++
Sbjct: 189 AISAHSAGSCLNQSN 203


>ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1,
           putative [Ricinus communis]
          Length = 873

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 58/133 (43%), Positives = 78/133 (58%)
 Frame = -1

Query: 402 SPIKPVKAAHVAQGFPELSIPTPPPVFTSPRLNPHPETNFLKRSKYSHSSNAALSLEHEH 223
           SPIKPVK AH AQGF  LS  +PP +FTSPR  P   T+FL+RS+    S+A +  E++ 
Sbjct: 44  SPIKPVKVAHGAQGFGALS--SPPLIFTSPRTLPERGTSFLQRSQLCQISSAEMP-ENDD 100

Query: 222 RRNTVVVGSDGSERSSRKLMVGLVPCIRKACDSKDSVQVQPCSPSGCVDEYLADSVEVGC 43
           RR  +V  S+  E S       L+   +K    K+S   QP S SGC+DEYL D V+V  
Sbjct: 101 RRKKLVDHSNDFEDSVAH-HSRLITDTQKETFVKNSTLDQPGSSSGCIDEYLNDPVDV-- 157

Query: 42  DSSDSANLCLNQA 4
           D ++  NL  ++A
Sbjct: 158 DGANCVNLTNSKA 170


>ref|XP_002324849.1| predicted protein [Populus trichocarpa] gi|222866283|gb|EEF03414.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 57/133 (42%), Positives = 74/133 (55%)
 Frame = -1

Query: 402 SPIKPVKAAHVAQGFPELSIPTPPPVFTSPRLNPHPETNFLKRSKYSHSSNAALSLEHEH 223
           SPIKPVKA+HVAQG   L I +PP VFTSPR     +TNFL+R      S A +S +++ 
Sbjct: 33  SPIKPVKASHVAQGL--LGINSPPLVFTSPRTLSDRQTNFLRRFPCPQISGAEIS-KNDG 89

Query: 222 RRNTVVVGSDGSERSSRKLMVGLVPCIRKACDSKDSVQVQPCSPSGCVDEYLADSVEVGC 43
                  G     +SS  L   L+  ++K+ +  +  Q Q  S SGCVDEYL D V+V C
Sbjct: 90  GSKKSADGPKDLRKSSTYLNSRLIINVQKSNNINNFEQDQLGSFSGCVDEYLFDPVDVDC 149

Query: 42  DSSDSANLCLNQA 4
             +DS NL    A
Sbjct: 150 --ADSVNLTKGDA 160


>ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 51/128 (39%), Positives = 69/128 (53%)
 Frame = -1

Query: 402 SPIKPVKAAHVAQGFPELSIPTPPPVFTSPRLNPHPETNFLKRSKYSHSSNAALSLEHEH 223
           SPIKPV  AHVA G   L I +PP VF SP      + N L+R +Y   S A  S   + 
Sbjct: 29  SPIKPVNTAHVAHGL--LGINSPPLVFKSPHTASDRQINLLRRFQYPQISGAETSKIDDG 86

Query: 222 RRNTVVVGSDGSERSSRKLMVGLVPCIRKACDSKDSVQVQPCSPSGCVDEYLADSVEVGC 43
            + ++  G +   +SS  L   L+   + + +  +S Q QP S SGCVDEYL+D V+  C
Sbjct: 87  SKKSID-GPEDMGKSSICLTSNLIVDSQTSDNVNNSEQDQPGSSSGCVDEYLSDPVDADC 145

Query: 42  DSSDSANL 19
             +DS NL
Sbjct: 146 --ADSVNL 151


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