BLASTX nr result

ID: Coptis24_contig00032964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032964
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327004.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
gb|ADP37985.1| carotenoid cleavage dioxygenase 7 [Actinidia chin...   134   8e-30
ref|XP_002511629.1| 9-cis-epoxycarotenoid dioxygenase, putative ...   132   3e-29
gb|ADB64459.1| more axillary branching 3 [Artemisia annua]            131   7e-29
gb|ACY74338.1| putative more axillary branching 3 [Artemisia ann...   131   7e-29

>ref|XP_002327004.1| predicted protein [Populus trichocarpa] gi|222835319|gb|EEE73754.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/124 (55%), Positives = 81/124 (65%), Gaps = 9/124 (7%)
 Frame = -3

Query: 347 MQATSYHFFPIKFXXXXXXXXXXXPT-----KVSCAVSISTPET----SLPRTTSTTDEL 195
           MQA  YH  P  F                  K+   +SISTP+T    S   +  T D+ 
Sbjct: 1   MQARPYHTAPTSFPSPSKLPRFHRTPSPAKIKIPRVISISTPDTADHASSRTSLDTIDDH 60

Query: 194 TTAFWDYQFLFVSQRTESVEPITLRVIEGAIPSDFPLGTYYLTGPGIFTDDHGSTVHPLD 15
             AFWDYQFLFVSQR+E+ E +TLRV++GAIPS+FP GTYYLTGPG+FTDDHGSTVHPLD
Sbjct: 61  VAAFWDYQFLFVSQRSETTEAVTLRVVDGAIPSNFPSGTYYLTGPGLFTDDHGSTVHPLD 120

Query: 14  GHGY 3
           GHGY
Sbjct: 121 GHGY 124


>gb|ADP37985.1| carotenoid cleavage dioxygenase 7 [Actinidia chinensis]
          Length = 605

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/120 (56%), Positives = 82/120 (68%), Gaps = 5/120 (4%)
 Frame = -3

Query: 347 MQATSYH-----FFPIKFXXXXXXXXXXXPTKVSCAVSISTPETSLPRTTSTTDELTTAF 183
           MQA S H      FP+             P K S A+SI+ P   L  T +  D+   AF
Sbjct: 1   MQAKSCHSFIPPIFPVSPAKIPPANKIFLPAKTSRAISITAPG-ELVLTPNVVDDSVAAF 59

Query: 182 WDYQFLFVSQRTESVEPITLRVIEGAIPSDFPLGTYYLTGPGIFTDDHGSTVHPLDGHGY 3
           WDYQFLFVSQR+E+V+P++LRV++GAIP DFP GTYYLTGPG+F+DDHGSTVHPLDGHGY
Sbjct: 60  WDYQFLFVSQRSETVDPVSLRVVDGAIPLDFPSGTYYLTGPGLFSDDHGSTVHPLDGHGY 119


>ref|XP_002511629.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
           gi|223548809|gb|EEF50298.1| 9-cis-epoxycarotenoid
           dioxygenase, putative [Ricinus communis]
          Length = 642

 Score =  132 bits (332), Expect = 3e-29
 Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 4/88 (4%)
 Frame = -3

Query: 254 VSISTPETSLPRTTST----TDELTTAFWDYQFLFVSQRTESVEPITLRVIEGAIPSDFP 87
           +SIS P+ +   +  T     D++  AFWDYQFLFVSQR+E+VEP+TLR++EGA+PSDFP
Sbjct: 68  ISISAPDNTHISSHVTFLEPIDDVIAAFWDYQFLFVSQRSETVEPVTLRLVEGAVPSDFP 127

Query: 86  LGTYYLTGPGIFTDDHGSTVHPLDGHGY 3
            GTYYLTGPG+FTDDHGSTVHPLDGHGY
Sbjct: 128 SGTYYLTGPGLFTDDHGSTVHPLDGHGY 155


>gb|ADB64459.1| more axillary branching 3 [Artemisia annua]
          Length = 620

 Score =  131 bits (329), Expect = 7e-29
 Identities = 56/72 (77%), Positives = 66/72 (91%)
 Frame = -3

Query: 218 TTSTTDELTTAFWDYQFLFVSQRTESVEPITLRVIEGAIPSDFPLGTYYLTGPGIFTDDH 39
           ++ST DE  TA+WDYQFLFVSQRTE+V P++LR++EG+IP DFPLGTYYLTGPG+F DDH
Sbjct: 48  SSSTQDEKITAYWDYQFLFVSQRTETVNPVSLRIVEGSIPLDFPLGTYYLTGPGLFKDDH 107

Query: 38  GSTVHPLDGHGY 3
           GSTVHPLDGHGY
Sbjct: 108 GSTVHPLDGHGY 119


>gb|ACY74338.1| putative more axillary branching 3 [Artemisia annua]
           gi|284055814|gb|ADB64458.1| more axillary branching 3
           [Artemisia annua]
          Length = 619

 Score =  131 bits (329), Expect = 7e-29
 Identities = 56/72 (77%), Positives = 66/72 (91%)
 Frame = -3

Query: 218 TTSTTDELTTAFWDYQFLFVSQRTESVEPITLRVIEGAIPSDFPLGTYYLTGPGIFTDDH 39
           ++ST DE  TA+WDYQFLFVSQRTE+V P++LR++EG+IP DFPLGTYYLTGPG+F DDH
Sbjct: 48  SSSTQDEKITAYWDYQFLFVSQRTETVNPVSLRIVEGSIPLDFPLGTYYLTGPGLFKDDH 107

Query: 38  GSTVHPLDGHGY 3
           GSTVHPLDGHGY
Sbjct: 108 GSTVHPLDGHGY 119


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