BLASTX nr result
ID: Coptis24_contig00032890
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032890 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223... 80 1e-13 emb|CBI27170.3| unnamed protein product [Vitis vinifera] 76 2e-12 ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 gb|ABK95033.1| unknown [Populus trichocarpa] 74 1e-11 ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ... 72 4e-11 >ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223536591|gb|EEF38235.1| ATPP2-A2, putative [Ricinus communis] Length = 213 Score = 80.5 bits (197), Expect = 1e-13 Identities = 33/49 (67%), Positives = 42/49 (85%) Frame = -1 Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69 KPRAQWIE+ GEF +SPD +G +EISM++YEGG WK+GLV+KGV +RP Sbjct: 156 KPRAQWIEVPAGEFVSSPDNIGRIEISMYDYEGGKWKRGLVVKGVTLRP 204 >emb|CBI27170.3| unnamed protein product [Vitis vinifera] Length = 239 Score = 76.3 bits (186), Expect = 2e-12 Identities = 30/49 (61%), Positives = 41/49 (83%) Frame = -1 Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69 KP+ QWIE+ VG+F TS + +G++E S+FEYEGG WK GLV+KGV+I+P Sbjct: 189 KPKGQWIEIPVGQFQTSAENIGEIEFSLFEYEGGDWKSGLVVKGVIIQP 237 >ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1| predicted protein [Populus trichocarpa] Length = 280 Score = 76.3 bits (186), Expect = 2e-12 Identities = 31/49 (63%), Positives = 40/49 (81%) Frame = -1 Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69 KPR QWIE+ VGEF TSP+ +G+++ M EY+GG WK+GLVIKG+ IRP Sbjct: 230 KPREQWIEVPVGEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRP 278 >gb|ABK95033.1| unknown [Populus trichocarpa] Length = 280 Score = 73.9 bits (180), Expect = 1e-11 Identities = 30/49 (61%), Positives = 39/49 (79%) Frame = -1 Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69 KPR QWIE+ VGE TSP+ +G+++ M EY+GG WK+GLVIKG+ IRP Sbjct: 230 KPREQWIEVPVGELITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRP 278 >ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] gi|355508931|gb|AES90073.1| F-box protein PP2-B10 [Medicago truncatula] gi|388501714|gb|AFK38923.1| unknown [Medicago truncatula] Length = 293 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/49 (67%), Positives = 39/49 (79%) Frame = -1 Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69 K RA+WIE+ VGEF S G+MEISMFEYEGG WK+GLVIKG+ I+P Sbjct: 241 KLRARWIEVPVGEFVVSEKDGGEMEISMFEYEGGMWKQGLVIKGIAIKP 289