BLASTX nr result

ID: Coptis24_contig00032890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032890
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223...    80   1e-13
emb|CBI27170.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
gb|ABK95033.1| unknown [Populus trichocarpa]                           74   1e-11
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...    72   4e-11

>ref|XP_002524124.1| ATPP2-A2, putative [Ricinus communis] gi|223536591|gb|EEF38235.1|
           ATPP2-A2, putative [Ricinus communis]
          Length = 213

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)
 Frame = -1

Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69
           KPRAQWIE+  GEF +SPD +G +EISM++YEGG WK+GLV+KGV +RP
Sbjct: 156 KPRAQWIEVPAGEFVSSPDNIGRIEISMYDYEGGKWKRGLVVKGVTLRP 204


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -1

Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69
           KP+ QWIE+ VG+F TS + +G++E S+FEYEGG WK GLV+KGV+I+P
Sbjct: 189 KPKGQWIEIPVGQFQTSAENIGEIEFSLFEYEGGDWKSGLVVKGVIIQP 237


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 31/49 (63%), Positives = 40/49 (81%)
 Frame = -1

Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69
           KPR QWIE+ VGEF TSP+ +G+++  M EY+GG WK+GLVIKG+ IRP
Sbjct: 230 KPREQWIEVPVGEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRP 278


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = -1

Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69
           KPR QWIE+ VGE  TSP+ +G+++  M EY+GG WK+GLVIKG+ IRP
Sbjct: 230 KPREQWIEVPVGELITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRP 278


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = -1

Query: 215 KPRAQWIELQVGEFYTSPDKLGDMEISMFEYEGGTWKKGLVIKGVVIRP 69
           K RA+WIE+ VGEF  S    G+MEISMFEYEGG WK+GLVIKG+ I+P
Sbjct: 241 KLRARWIEVPVGEFVVSEKDGGEMEISMFEYEGGMWKQGLVIKGIAIKP 289


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