BLASTX nr result

ID: Coptis24_contig00032861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032861
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522472.1| conserved hypothetical protein [Ricinus comm...   247   1e-63
ref|XP_002266005.2| PREDICTED: uncharacterized protein LOC100260...   232   3e-59
ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264...   227   1e-57
emb|CAN72785.1| hypothetical protein VITISV_039508 [Vitis vinifera]   227   1e-57

>ref|XP_002522472.1| conserved hypothetical protein [Ricinus communis]
           gi|223538357|gb|EEF39964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 484

 Score =  247 bits (630), Expect = 1e-63
 Identities = 124/181 (68%), Positives = 142/181 (78%), Gaps = 3/181 (1%)
 Frame = +2

Query: 11  HLQNPERVVDGK---DQVVGISRSLPGLAISQDGRHWARIEGEHHSGALFDVGEEKEWDS 181
           +++NPE+   G    D    I +SLPGLAISQDGRHWARIEGEHHSGALFDVG E EWDS
Sbjct: 248 NVENPEKFCFGNENSDDGRNIFKSLPGLAISQDGRHWARIEGEHHSGALFDVGSECEWDS 307

Query: 182 LFIAGPQVVFHSSGDLRMYYYSFDDKCGQFAVGLARSRDGIKWVXXXXXXXXXXXXXFDE 361
           LFIA PQVVFH +GDLRMYY+SFD + GQF +G+ARSRDGIKWV             FDE
Sbjct: 308 LFIASPQVVFHGNGDLRMYYHSFDMENGQFGIGIARSRDGIKWVKLGKIMGGGKSGSFDE 367

Query: 362 FGVMNAHVMRNQKDGDYVMAYEGVAADGGRSIGLAVSRDGLKDWRKYGDGAVLKPSVEED 541
           FGVMNA V++++KDG YVMAYEGVA+DG RSIGLAVS DGLKDWR++ DG VLKPS E+D
Sbjct: 368 FGVMNASVVKSKKDGKYVMAYEGVASDGKRSIGLAVSPDGLKDWRRFQDGEVLKPS-EKD 426

Query: 542 G 544
           G
Sbjct: 427 G 427


>ref|XP_002266005.2| PREDICTED: uncharacterized protein LOC100260888 [Vitis vinifera]
          Length = 503

 Score =  232 bits (591), Expect = 3e-59
 Identities = 119/181 (65%), Positives = 135/181 (74%)
 Frame = +2

Query: 2   SKVHLQNPERVVDGKDQVVGISRSLPGLAISQDGRHWARIEGEHHSGALFDVGEEKEWDS 181
           +K+ LQNPERV   K     I +SLPGLA SQDGRHWARIEG+HHSGAL DVG   EWDS
Sbjct: 267 AKIPLQNPERVDREKHVSGKIFKSLPGLACSQDGRHWARIEGDHHSGALLDVGSRGEWDS 326

Query: 182 LFIAGPQVVFHSSGDLRMYYYSFDDKCGQFAVGLARSRDGIKWVXXXXXXXXXXXXXFDE 361
           LFIA PQVV HSS DLRMYY+SFD + GQF VG+ARSRDGI+WV             FDE
Sbjct: 327 LFIAAPQVVVHSSDDLRMYYHSFDVERGQFGVGIARSRDGIRWVKLGKIMEGGSNGSFDE 386

Query: 362 FGVMNAHVMRNQKDGDYVMAYEGVAADGGRSIGLAVSRDGLKDWRKYGDGAVLKPSVEED 541
            GVMNA V+R+QKDG Y+MAYEGV  D GRSIGLAVS DGLK+W++  +  VL+PS EED
Sbjct: 387 LGVMNACVVRDQKDGRYLMAYEGVGGDNGRSIGLAVSPDGLKNWKRLQEEPVLEPS-EED 445

Query: 542 G 544
           G
Sbjct: 446 G 446


>ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|222869554|gb|EEF06685.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  229 bits (585), Expect = 2e-58
 Identities = 109/159 (68%), Positives = 129/159 (81%)
 Frame = +2

Query: 62  ISRSLPGLAISQDGRHWARIEGEHHSGALFDVGEEKEWDSLFIAGPQVVFHSSGDLRMYY 241
           I +SLPGLA+SQDGRHWARIEGEHHSGALFDVG E+EWDSLFIAGP+VVFH + DLRMYY
Sbjct: 127 IFKSLPGLAMSQDGRHWARIEGEHHSGALFDVGSEREWDSLFIAGPRVVFHGNSDLRMYY 186

Query: 242 YSFDDKCGQFAVGLARSRDGIKWVXXXXXXXXXXXXXFDEFGVMNAHVMRNQKDGDYVMA 421
           +SFD + GQF +G+ARSRDGI W+             FDEFG +NA V+RN+KDG Y+MA
Sbjct: 187 HSFDVESGQFGIGIARSRDGINWMKLGKIIGGGKISSFDEFGALNACVVRNKKDGRYLMA 246

Query: 422 YEGVAADGGRSIGLAVSRDGLKDWRKYGDGAVLKPSVEE 538
           YEGVAA G RSIGLAVS DGL+DWR++ D AVL+ SV++
Sbjct: 247 YEGVAAGGKRSIGLAVSPDGLRDWRRFQDEAVLESSVKD 285


>ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264211 [Vitis vinifera]
          Length = 491

 Score =  227 bits (578), Expect = 1e-57
 Identities = 114/183 (62%), Positives = 143/183 (78%), Gaps = 3/183 (1%)
 Frame = +2

Query: 5   KVHLQNPERV--VDGKDQVVG-ISRSLPGLAISQDGRHWARIEGEHHSGALFDVGEEKEW 175
           +++L+NPER    +G++  +G I +SLPGLAISQDGRHWARIEGEHH+GALFDVG E EW
Sbjct: 251 ELYLENPERAGAENGENGGIGKIFKSLPGLAISQDGRHWARIEGEHHTGALFDVGLENEW 310

Query: 176 DSLFIAGPQVVFHSSGDLRMYYYSFDDKCGQFAVGLARSRDGIKWVXXXXXXXXXXXXXF 355
           DS++IA PQVVFH +GDLRMYY+SFD + GQFA+G+ARS+DGI+WV             F
Sbjct: 311 DSMYIASPQVVFHGNGDLRMYYHSFDVENGQFAIGIARSKDGIRWVKLGKIMGGGISGSF 370

Query: 356 DEFGVMNAHVMRNQKDGDYVMAYEGVAADGGRSIGLAVSRDGLKDWRKYGDGAVLKPSVE 535
           DE GV+ A V++N++DG YVMAYEGV  +G RSIGLAVS DGLK+WR+  D AVL P+ E
Sbjct: 371 DESGVVKACVVKNRRDGKYVMAYEGVDGNGRRSIGLAVSPDGLKEWRRSQDEAVLMPA-E 429

Query: 536 EDG 544
           +DG
Sbjct: 430 DDG 432


>emb|CAN72785.1| hypothetical protein VITISV_039508 [Vitis vinifera]
          Length = 531

 Score =  227 bits (578), Expect = 1e-57
 Identities = 114/183 (62%), Positives = 143/183 (78%), Gaps = 3/183 (1%)
 Frame = +2

Query: 5   KVHLQNPERV--VDGKDQVVG-ISRSLPGLAISQDGRHWARIEGEHHSGALFDVGEEKEW 175
           +++L+NPER    +G++  +G I +SLPGLAISQDGRHWARIEGEHH+GALFDVG E EW
Sbjct: 251 ELYLENPERAGAENGENGGIGKIFKSLPGLAISQDGRHWARIEGEHHTGALFDVGLENEW 310

Query: 176 DSLFIAGPQVVFHSSGDLRMYYYSFDDKCGQFAVGLARSRDGIKWVXXXXXXXXXXXXXF 355
           DS++IA PQVVFH +GDLRMYY+SFD + GQFA+G+ARS+DGI+WV             F
Sbjct: 311 DSMYIASPQVVFHGNGDLRMYYHSFDVENGQFAIGIARSKDGIRWVKLGKIMGGGISGSF 370

Query: 356 DEFGVMNAHVMRNQKDGDYVMAYEGVAADGGRSIGLAVSRDGLKDWRKYGDGAVLKPSVE 535
           DE GV+ A V++N++DG YVMAYEGV  +G RSIGLAVS DGLK+WR+  D AVL P+ E
Sbjct: 371 DESGVVKACVVKNRRDGKYVMAYEGVDGNGRRSIGLAVSPDGLKEWRRSQDEAVLMPA-E 429

Query: 536 EDG 544
           +DG
Sbjct: 430 DDG 432


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