BLASTX nr result

ID: Coptis24_contig00032813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032813
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550330.1| PREDICTED: protein ssh4-like [Glycine max]        139   2e-31
emb|CBI19487.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]     138   5e-31
ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788...   137   9e-31
ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478...   131   7e-29

>ref|XP_003550330.1| PREDICTED: protein ssh4-like [Glycine max]
          Length = 213

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/86 (75%), Positives = 75/86 (87%)
 Frame = +1

Query: 1   FFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVLNFGQRSFKYAPANSHRTTNPCFI 180
           FFT+DSELVHVIHC+S+EFG+PL PTLAANIDI V++NFGQ +FKYAPAN+ RT NPCFI
Sbjct: 83  FFTLDSELVHVIHCQSEEFGTPLCPTLAANIDIQVLVNFGQSAFKYAPANAQRTPNPCFI 142

Query: 181 RSVTNGHTATLGYEDSKELFSMGRID 258
             + N   ATLGY+DSKELFSMGRID
Sbjct: 143 APLVNSPGATLGYDDSKELFSMGRID 168


>emb|CBI19487.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/86 (73%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   FFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVLNFGQRSFKYAPANSHRTTNPCFI 180
           FFTIDSELVHV+HCKS+EFGSPLYPTL AN D+ V++NFGQ  F YAPAN+ RT NPCFI
Sbjct: 67  FFTIDSELVHVVHCKSEEFGSPLYPTLGANTDVEVLVNFGQSMFSYAPANAQRTPNPCFI 126

Query: 181 RSVTNGHTATLGYEDSKELFSMGRID 258
             + N   A LGYEDS+ELFSMGRID
Sbjct: 127 GPLVNSPAAALGYEDSRELFSMGRID 152


>ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]
          Length = 305

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/86 (73%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   FFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVLNFGQRSFKYAPANSHRTTNPCFI 180
           FFTIDSELVHV+HCKS+EFGSPLYPTL AN D+ V++NFGQ  F YAPAN+ RT NPCFI
Sbjct: 174 FFTIDSELVHVVHCKSEEFGSPLYPTLGANTDVEVLVNFGQSMFSYAPANAQRTPNPCFI 233

Query: 181 RSVTNGHTATLGYEDSKELFSMGRID 258
             + N   A LGYEDS+ELFSMGRID
Sbjct: 234 GPLVNSPAAALGYEDSRELFSMGRID 259


>ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788520 [Glycine max]
          Length = 465

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = +1

Query: 1   FFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVLNFGQRSFKYAPANSHRTTNPCFI 180
           FFT+DSELVHVIHC+S+EF +PL PTLAANIDI V++NFGQ +FKYAPAN+ RT NPCFI
Sbjct: 332 FFTLDSELVHVIHCQSEEFATPLCPTLAANIDIQVLVNFGQSAFKYAPANAQRTPNPCFI 391

Query: 181 RSVTNGHTATLGYEDSKELFSMGRID 258
             + N   ATLGY+DSKELFSMGRID
Sbjct: 392 APLVNSPGATLGYDDSKELFSMGRID 417


>ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1|
           Protein ssh4 [Medicago truncatula]
          Length = 446

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/86 (70%), Positives = 73/86 (84%)
 Frame = +1

Query: 1   FFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVLNFGQRSFKYAPANSHRTTNPCFI 180
           FFT+DSELVHVIHC+S+EF +PL PTLAANIDI V++NFGQ +FKYAPAN+ RT NPCFI
Sbjct: 310 FFTLDSELVHVIHCQSEEFSTPLCPTLAANIDIMVLVNFGQIAFKYAPANAQRTPNPCFI 369

Query: 181 RSVTNGHTATLGYEDSKELFSMGRID 258
             + +   A LG++DSKELFSMGRID
Sbjct: 370 APLVHSPGAALGFDDSKELFSMGRID 395


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