BLASTX nr result

ID: Coptis24_contig00032786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032786
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528541.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243...   121   7e-26
emb|CAN77926.1| hypothetical protein VITISV_018738 [Vitis vinifera]   121   7e-26
ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana] g...   118   6e-25
gb|AAM64960.1| unknown [Arabidopsis thaliana]                         118   6e-25

>ref|XP_002528541.1| conserved hypothetical protein [Ricinus communis]
           gi|223532043|gb|EEF33853.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/71 (80%), Positives = 66/71 (92%)
 Frame = +1

Query: 1   GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 180
           GA+G++KGAI QPRLLVPV LVMIYNRWNGI+VP+YGLMHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GAKGLIKGAIGQPRLLVPVVLVMIYNRWNGILVPDYGLMHLELIPMLVGFFTYKIATFVQ 326

Query: 181 AIEEAVSIVKE 213
           AIEEAV++  E
Sbjct: 327 AIEEAVTVAVE 337


>ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243760 [Vitis vinifera]
           gi|302143424|emb|CBI21985.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/69 (81%), Positives = 66/69 (95%)
 Frame = +1

Query: 1   GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 180
           GA+G++KGAI+QPRLLVPVALVMIYNRWN IVVPE+G MHL+LIPML+GFFTYK+ATF Q
Sbjct: 263 GAKGLMKGAIAQPRLLVPVALVMIYNRWNEIVVPEFGFMHLELIPMLVGFFTYKVATFVQ 322

Query: 181 AIEEAVSIV 207
           AIEEA++IV
Sbjct: 323 AIEEALTIV 331


>emb|CAN77926.1| hypothetical protein VITISV_018738 [Vitis vinifera]
          Length = 338

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/69 (81%), Positives = 66/69 (95%)
 Frame = +1

Query: 1   GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 180
           GA+G++KGAI+QPRLLVPVALVMIYNRWN IVVPE+G MHL+LIPML+GFFTYK+ATF Q
Sbjct: 263 GAKGLMKGAIAQPRLLVPVALVMIYNRWNEIVVPEFGFMHLELIPMLVGFFTYKVATFVQ 322

Query: 181 AIEEAVSIV 207
           AIEEA++IV
Sbjct: 323 AIEEALTIV 331


>ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana]
           gi|3746067|gb|AAC63842.1| expressed protein [Arabidopsis
           thaliana] gi|15215861|gb|AAK91474.1| At2g31040/T16B12.15
           [Arabidopsis thaliana] gi|19699268|gb|AAL91000.1|
           At2g31040/T16B12.15 [Arabidopsis thaliana]
           gi|20197222|gb|AAM14978.1| expressed protein
           [Arabidopsis thaliana] gi|330253388|gb|AEC08482.1| ATP
           synthase protein I [Arabidopsis thaliana]
          Length = 350

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/71 (77%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 180
           GARG+ KGA +QPRLLVPV LVMI+NRWN I+VPEYG MHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQ 326

Query: 181 AIEEAVSIVKE 213
           AIEEA+SI  +
Sbjct: 327 AIEEAISITTQ 337


>gb|AAM64960.1| unknown [Arabidopsis thaliana]
          Length = 350

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/71 (77%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 180
           GARG+ KGA +QPRLLVPV LVMI+NRWN I+VPEYG MHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQ 326

Query: 181 AIEEAVSIVKE 213
           AIEEA+SI  +
Sbjct: 327 AIEEAISITTQ 337


Top