BLASTX nr result

ID: Coptis24_contig00032775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032775
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   119   3e-25
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   115   3e-24
ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   115   3e-24

>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/70 (81%), Positives = 61/70 (87%)
 Frame = +3

Query: 3   FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182
           FCMQLSK PVKSFS+KPF +SIM RELC+AE+EV   K LVVATSHLESPCP PP WDQM
Sbjct: 225 FCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKKSLVVATSHLESPCPAPPKWDQM 284

Query: 183 FSKERVDQAK 212
           FSKERVDQAK
Sbjct: 285 FSKERVDQAK 294


>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = +3

Query: 3   FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182
           FCM LSK PVKSFS K F +SIM RELC+AE+EV+AGKPLV+ATSHLESPCP PP WDQM
Sbjct: 250 FCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQM 309

Query: 183 FSKERVDQAK 212
           +SKERVDQAK
Sbjct: 310 YSKERVDQAK 319


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = +3

Query: 3   FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182
           FCM LSK PVKSFS K F +SIM RELC+AE+EV+AGKPLV+ATSHLESPCP PP WDQM
Sbjct: 764 FCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQM 823

Query: 183 FSKERVDQAK 212
           +SKERVDQAK
Sbjct: 824 YSKERVDQAK 833


>ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine
           max]
          Length = 401

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182
           FCM LSK PVKSFS+KPF +SIM RELC+AE+E  +GKPLV+ATSHLESPCP PP WDQM
Sbjct: 204 FCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQM 263

Query: 183 FSKERVDQA 209
           +SKERV QA
Sbjct: 264 YSKERVVQA 272


>ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine
           max]
          Length = 402

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182
           FCM LSK PVKSFS+KPF +SIM RELC+AE+E  +GKPLV+ATSHLESPCP PP WDQM
Sbjct: 205 FCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQM 264

Query: 183 FSKERVDQA 209
           +SKERV QA
Sbjct: 265 YSKERVVQA 273


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