BLASTX nr result
ID: Coptis24_contig00032775
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032775 (212 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [... 119 3e-25 emb|CBI23232.3| unnamed protein product [Vitis vinifera] 119 3e-25 ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l... 115 3e-24 ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l... 115 3e-24 >ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1| predicted protein [Populus trichocarpa] Length = 422 Score = 120 bits (300), Expect = 1e-25 Identities = 57/70 (81%), Positives = 61/70 (87%) Frame = +3 Query: 3 FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182 FCMQLSK PVKSFS+KPF +SIM RELC+AE+EV K LVVATSHLESPCP PP WDQM Sbjct: 225 FCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKKSLVVATSHLESPCPAPPKWDQM 284 Query: 183 FSKERVDQAK 212 FSKERVDQAK Sbjct: 285 FSKERVDQAK 294 >ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera] Length = 447 Score = 119 bits (298), Expect = 3e-25 Identities = 56/70 (80%), Positives = 62/70 (88%) Frame = +3 Query: 3 FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182 FCM LSK PVKSFS K F +SIM RELC+AE+EV+AGKPLV+ATSHLESPCP PP WDQM Sbjct: 250 FCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQM 309 Query: 183 FSKERVDQAK 212 +SKERVDQAK Sbjct: 310 YSKERVDQAK 319 >emb|CBI23232.3| unnamed protein product [Vitis vinifera] Length = 961 Score = 119 bits (298), Expect = 3e-25 Identities = 56/70 (80%), Positives = 62/70 (88%) Frame = +3 Query: 3 FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182 FCM LSK PVKSFS K F +SIM RELC+AE+EV+AGKPLV+ATSHLESPCP PP WDQM Sbjct: 764 FCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQM 823 Query: 183 FSKERVDQAK 212 +SKERVDQAK Sbjct: 824 YSKERVDQAK 833 >ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine max] Length = 401 Score = 115 bits (289), Expect = 3e-24 Identities = 53/69 (76%), Positives = 60/69 (86%) Frame = +3 Query: 3 FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182 FCM LSK PVKSFS+KPF +SIM RELC+AE+E +GKPLV+ATSHLESPCP PP WDQM Sbjct: 204 FCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQM 263 Query: 183 FSKERVDQA 209 +SKERV QA Sbjct: 264 YSKERVVQA 272 >ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine max] Length = 402 Score = 115 bits (289), Expect = 3e-24 Identities = 53/69 (76%), Positives = 60/69 (86%) Frame = +3 Query: 3 FCMQLSKEPVKSFSSKPFRSSIMERELCVAEIEVKAGKPLVVATSHLESPCPGPPTWDQM 182 FCM LSK PVKSFS+KPF +SIM RELC+AE+E +GKPLV+ATSHLESPCP PP WDQM Sbjct: 205 FCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQM 264 Query: 183 FSKERVDQA 209 +SKERV QA Sbjct: 265 YSKERVVQA 273