BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032773
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
emb|CBI29931.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   108   4e-22
ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22

>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           WVAMIS LSQNGRE EA+ LFC+M KS  IPTPYVFSS +SA TKI ++K GEQLHG  +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 60  KWGFSSETFVCNALVSLYS 4
           KWG SSETFVCNALV+LYS
Sbjct: 241 KWGLSSETFVCNALVTLYS 259



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W A+IS  +Q+G  +EAL +F +M ++G     + F SA+SA+      K G+Q+H   +
Sbjct: 585 WNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMI 644

Query: 60  KWGFSSETFVCNALVSLYS 4
           K G+ SET   N L++LYS
Sbjct: 645 KTGYDSETEASNVLITLYS 663



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/79 (32%), Positives = 42/79 (53%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W  M+ A  Q G   E+  +F +M+  G +P  Y + S +   T +G    GEQ+H Q +
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442

Query: 60  KWGFSSETFVCNALVSLYS 4
           K GF    +VC+ L+ +Y+
Sbjct: 443 KSGFQFNVYVCSVLIDMYA 461



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W AMI+  +Q+    EAL LF  M   G       FSSAISA   I     G+Q+H Q+ 
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSY 543

Query: 60  KWGFSSETFVCNALVSLYS 4
             G+S +  + NALVSLY+
Sbjct: 544 ISGYSEDLSIGNALVSLYA 562


>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           WVAMIS LSQNGRE EA+ LFC+M KS  IPTPYVFSS +SA TKI ++K GEQLHG  +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 60  KWGFSSETFVCNALVSLYS 4
           KWG SSETFVCNALV+LYS
Sbjct: 241 KWGLSSETFVCNALVTLYS 259



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/79 (32%), Positives = 42/79 (53%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W  M+ A  Q G   E+  +F +M+  G +P  Y + S +   T +G    GEQ+H Q +
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442

Query: 60  KWGFSSETFVCNALVSLYS 4
           K GF    +VC+ L+ +Y+
Sbjct: 443 KSGFQFNVYVCSVLIDMYA 461


>ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           WVAM+S LSQ+G E+EA+ LFC+M  SG  PTPY+FSS +SA TK+  YK GEQLHG  L
Sbjct: 239 WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVL 298

Query: 60  KWGFSSETFVCNALVSLYS 4
           K GFS ET+VCNALV+LYS
Sbjct: 299 KQGFSLETYVCNALVTLYS 317



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/79 (39%), Positives = 49/79 (62%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W ++IS  +Q+G  +EAL+LF +M K+G     + F  A+SA+  +   K G+Q+H   +
Sbjct: 643 WNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMII 702

Query: 60  KWGFSSETFVCNALVSLYS 4
           K G  SET V N L++LY+
Sbjct: 703 KTGHDSETEVSNVLITLYA 721



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/79 (44%), Positives = 46/79 (58%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W AMI+  +Q+ +  EALNLF  M+  G       F+SAISA   I     G+Q+H QA 
Sbjct: 542 WTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQAC 601

Query: 60  KWGFSSETFVCNALVSLYS 4
             G+S +  V NALVSLY+
Sbjct: 602 VSGYSDDLSVGNALVSLYA 620


>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           WVAMIS LSQNG E+EA+ LFC M  S   PTPYV SS +SASTKI +++ GEQLH   +
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVI 288

Query: 60  KWGFSSETFVCNALVSLYS 4
           KWGF SET+VCN LV+LYS
Sbjct: 289 KWGFHSETYVCNGLVALYS 307



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/79 (39%), Positives = 50/79 (63%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W +++S L+Q+G  +EAL +F RM ++      + + SAISA+  +   K G+Q+H   L
Sbjct: 633 WNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVL 692

Query: 60  KWGFSSETFVCNALVSLYS 4
           K G+ SE  V N+L+SLY+
Sbjct: 693 KTGYDSEREVSNSLISLYA 711



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W  M+ A  Q     ++  +F +M+  G IP  + + S +   T +G    GEQ+H   +
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490

Query: 60  KWGFSSETFVCNALVSLYS 4
           K GF    +VC+ L+ +Y+
Sbjct: 491 KTGFQLNVYVCSVLIDMYA 509



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W AMI+   Q+    EAL LF  M   G       F+SAISA   I   + G+Q+H Q+ 
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591

Query: 60  KWGFSSETFVCNALVSLYS 4
             GF ++  + NAL+SLY+
Sbjct: 592 AAGFGADLSINNALISLYA 610


>ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           WVAMIS LSQNG E+EA+ LFC M  S   PTPYV SS +SASTKI +++ GEQLH   +
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVI 288

Query: 60  KWGFSSETFVCNALVSLYS 4
           KWGF SET+VCN LV+LYS
Sbjct: 289 KWGFHSETYVCNGLVALYS 307



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/79 (39%), Positives = 50/79 (63%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W +++S L+Q+G  +EAL +F RM ++      + + SAISA+  +   K G+Q+H   L
Sbjct: 633 WNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVL 692

Query: 60  KWGFSSETFVCNALVSLYS 4
           K G+ SE  V N+L+SLY+
Sbjct: 693 KTGYDSEREVSNSLISLYA 711



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W  M+ A  Q     ++  +F +M+  G IP  + + S +   T +G    GEQ+H   +
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490

Query: 60  KWGFSSETFVCNALVSLYS 4
           K GF    +VC+ L+ +Y+
Sbjct: 491 KTGFQLNVYVCSVLIDMYA 509



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = -3

Query: 240 WVAMISALSQNGREKEALNLFCRMRKSGTIPTPYVFSSAISASTKIGMYKHGEQLHGQAL 61
           W AMI+   Q+    EAL LF  M   G       F+SAISA   I   + G+Q+H Q+ 
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591

Query: 60  KWGFSSETFVCNALVSLYS 4
             GF ++  + NAL+SLY+
Sbjct: 592 AAGFGADLSINNALISLYA 610