BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032735
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874080.1| hypothetical protein ARALYDRAFT_489122 [Arab...    64   1e-08
ref|XP_002877808.1| F-box family protein [Arabidopsis lyrata sub...    64   1e-08
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    63   3e-08
ref|NP_190721.3| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    62   4e-08

>ref|XP_002874080.1| hypothetical protein ARALYDRAFT_489122 [Arabidopsis lyrata subsp.
           lyrata] gi|297319917|gb|EFH50339.1| hypothetical protein
           ARALYDRAFT_489122 [Arabidopsis lyrata subsp. lyrata]
          Length = 390

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -2

Query: 366 NEDVINDVYVNAWIYFAIKHNVRVLE-LSYPW-----EVFPDCVFKCHTLTELRLEYVDF 205
           N +  +  Y+  WI+ A+   V+ L+ LS  W     E+ P  ++ C TL  L+L YV  
Sbjct: 37  NRNQRDQSYLTQWIHNAVMLEVQDLDILSCGWSYLGTELMPLSLYTCETLVSLKLHYVSL 96

Query: 204 HLTSTVSLPSLKILKLTENVIYGEKLTENLFSSCHVLEEL 85
                VSLP LKI+ L +N+   + L ENL SSC VLE+L
Sbjct: 97  PDFDYVSLPRLKIMHLEDNIYPNDALLENLISSCPVLEDL 136


>ref|XP_002877808.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323646|gb|EFH54067.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 446

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
 Frame = -2

Query: 360 DVINDVYVNAWIYFAIKHNVR--VLELSYPWEV---FPDCVFKCHTLTELRL-EYVDFHL 199
           D  + VYV  W   A   +VR  VL+LS+   +   FP  +F   TL  L+L  YV    
Sbjct: 95  DQFDGVYVGVWATIAFARHVREFVLDLSFCHGLQIRFPSSLFCFDTLETLKLMNYVYLDF 154

Query: 198 TSTVSLPSLKILKLTENVIYGEKLTENLFSSCHVLEELIIRSCSWHDF-NTIICSPPNLK 22
            S VS+ SL+ L L   V  G++   NLFSSC  LE L++R    HD+        P+LK
Sbjct: 155 PSLVSMKSLRTLHLLSLVYKGDESVHNLFSSCPNLEHLVLRRGFSHDYVKNFTIEAPSLK 214

Query: 21  VLELLEN 1
            L L ++
Sbjct: 215 TLSLSDS 221


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
 Frame = -2

Query: 339 VNAWIYFAIKHNVRVLELSY-PWE---VFPDCVFKCHTLTELRLE--YVDFHLTSTVSLP 178
           V  WI  A+  NV+ L L    +E   V P C+F C TLTEL +   Y+   L S++SL 
Sbjct: 113 VGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYI-LKLPSSISLS 171

Query: 177 SLKILKLTENVIYGEKLTENLFSSCHVLEELIIRSCSWHDFNTIICSPPNLKVLELLE 4
            LKIL L E +   +  T+ LFS  + L EL I  C+W +   +  S P L+ L++ E
Sbjct: 172 CLKILNLYEVIFTDDHSTQQLFSLPN-LVELEIHECNWMNLVAVSISAPKLQSLDIHE 228


>ref|NP_197659.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262763|sp|Q9FNJ4.1|FDL32_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At5g22670
           gi|10178241|dbj|BAB11673.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005679|gb|AED93062.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 443

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
 Frame = -2

Query: 342 YVNAWIYFAIKHNVRVLELSYPW-----EVFPDCVFKCHTLTELRLEYVDFHLTSTVSLP 178
           Y+  WI+ A+K  V+ L++   W     E+ P  ++ C TL  LRL  V       VSLP
Sbjct: 98  YLTQWIHNAVKRKVQHLDIGR-WSYLGQELIPHSLYTCETLVSLRLHNVSLPDFDHVSLP 156

Query: 177 SLKILKLTENVIYGEKLTENLFSSCHVLEEL 85
            LK + L +N+   + L ENL SSC VLE+L
Sbjct: 157 RLKTMHLIDNIYPNDALLENLISSCPVLEDL 187


>ref|NP_190721.3| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75276325|sp|Q501E9.1|FDL20_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At3g51530
           gi|63003802|gb|AAY25430.1| At3g51530 [Arabidopsis
           thaliana] gi|110739329|dbj|BAF01577.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|115646881|gb|ABJ17151.1| At3g51530 [Arabidopsis
           thaliana] gi|332645282|gb|AEE78803.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 455

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
 Frame = -2

Query: 360 DVINDVYVNAWIYFAIKHNVR--VLELSY---PWEVFPDCVFKCHTLTELRLEYVDFHLT 196
           D  + VYV  W   A   +VR  VL+LS    P   FP  +F   TL  L+L+YV  ++ 
Sbjct: 108 DQFDGVYVGVWATIAFTRHVREFVLDLSSYHGPRVRFPTSLFCFDTLETLKLDYVYIYVP 167

Query: 195 STVSLPSLKILKLTENVIYGEKLTENLFSSCHVLEELIIRSCSWHD-FNTIICSPPNLKV 19
             VS+ SL+ L L   V  G++   NLF+SC  LE L++R   + D     I   P+LK 
Sbjct: 168 CPVSMKSLRTLHLLSVVYKGDESGHNLFASCPNLEHLVLRRGFFFDAVVNFIIDAPSLKT 227

Query: 18  LEL 10
           L L
Sbjct: 228 LLL 230