BLASTX nr result

ID: Coptis24_contig00032714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032714
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]    94   9e-18
emb|CBI23670.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [...    69   3e-10
ref|XP_002528826.1| Kinesin heavy chain, putative [Ricinus commu...    64   1e-08
ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]
          Length = 980

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 12/113 (10%)
 Frame = +3

Query: 30   INNAGETPSSGME------------PFAPLKFSNEQNLVESQLKKGRISFETVEDMKENS 173
            +  +G  P SG+E             FA +K +NEQ L+E+Q+ + R S +     KEN 
Sbjct: 766  VQKSGSVPESGIENQIPCDVTVKGISFATVKLANEQKLIEAQMNRSRASDDMALASKENL 825

Query: 174  MPEEEMITASVQVFVKWEPSKECPGEFITKLKVVKDCTLADLRKLIEINLDED 332
             P  E   A  +V+VKWE SKE PG+FIT LKV++D +LADLRKLIE++L ED
Sbjct: 826  NPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLADLRKLIEMHLGED 878


>emb|CBI23670.3| unnamed protein product [Vitis vinifera]
          Length = 173

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +3

Query: 120 LKKGRISFETVEDMKENSMPEEEMITASVQVFVKWEPSKECPGEFITKLKVVKDCTLADL 299
           + + R S +     KEN  P  E   A  +V+VKWE SKE PG+FIT LKV++D +LADL
Sbjct: 1   MNRSRASDDMALASKENLNPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLADL 60

Query: 300 RKLIEINLDED 332
           RKLIEI+L ED
Sbjct: 61  RKLIEIHLGED 71


>ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [Vitis vinifera]
          Length = 929

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = +3

Query: 165 ENSMPEEEMITASVQVFVKWEPSKECPGEFITKLKVVKDCTLADLRKLIEINLDED 332
           EN  P  E   A  +V+VKWE SKE PG+FIT LKV++D +LADLRKLIEI+L ED
Sbjct: 772 ENLNPVNEDTGAMTEVYVKWEASKENPGKFITTLKVLRDSSLADLRKLIEIHLGED 827


>ref|XP_002528826.1| Kinesin heavy chain, putative [Ricinus communis]
           gi|223531738|gb|EEF33560.1| Kinesin heavy chain,
           putative [Ricinus communis]
          Length = 911

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = +3

Query: 162 KENSMPEEEMITASVQVFVKWEPSKECPGEFITKLKVVKDCTLADLRKLIEINL 323
           KEN  P +E     + V VKWE SK   G+FIT LKVVKD TLADLRKLIEI L
Sbjct: 738 KENHNPSKESNDGQIDVHVKWEASKGNNGKFITTLKVVKDATLADLRKLIEIYL 791


>ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|222864611|gb|EEF01742.1|
           predicted protein [Populus trichocarpa]
          Length = 889

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/57 (57%), Positives = 39/57 (68%)
 Frame = +3

Query: 162 KENSMPEEEMITASVQVFVKWEPSKECPGEFITKLKVVKDCTLADLRKLIEINLDED 332
           KEN  P  ++  + ++V VKWE SK   G FIT LKV+KD TLADLRKLIEI L  D
Sbjct: 729 KENYNPSVKITDSQIEVHVKWEASKGNSGNFITTLKVLKDATLADLRKLIEIYLAAD 785


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