BLASTX nr result

ID: Coptis24_contig00032681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032681
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34108.1| unknown [Lotus japonicus]                              149   2e-34
ref|XP_002300713.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
gb|ABK96403.1| unknown [Populus trichocarpa x Populus deltoides]      148   5e-34
ref|XP_002510519.1| conserved hypothetical protein [Ricinus comm...   146   1e-33
ref|XP_003550421.1| PREDICTED: uncharacterized protein LOC100815...   146   2e-33

>gb|AFK34108.1| unknown [Lotus japonicus]
          Length = 156

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/97 (73%), Positives = 78/97 (80%)
 Frame = -1

Query: 303 PTSYPCIKALELDQNTXXXXXXXXXXXXXXXXIPVFYESQIDNASKRENTQPCFPCNGTG 124
           PTSYP I+ALE DQNT                IPVFYESQIDNA+KR+NTQPCFPC+G+G
Sbjct: 37  PTSYPRIRALEFDQNTVIAITVGVASVAIGIGIPVFYESQIDNAAKRDNTQPCFPCSGSG 96

Query: 123 AQKCRFCVGSGNVTVELGGDEKEVSLCINCDGAGSLT 13
           AQKCRFC+G+GNVTVELGGDEKEVS CINCDGAGSLT
Sbjct: 97  AQKCRFCLGTGNVTVELGGDEKEVSRCINCDGAGSLT 133


>ref|XP_002300713.1| predicted protein [Populus trichocarpa] gi|222842439|gb|EEE79986.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/97 (70%), Positives = 78/97 (80%)
 Frame = -1

Query: 303 PTSYPCIKALELDQNTXXXXXXXXXXXXXXXXIPVFYESQIDNASKRENTQPCFPCNGTG 124
           P SYPCI+A++LDQNT                IPVFYESQIDNA+KR+NTQPCFPC+G+G
Sbjct: 40  PVSYPCIRAIDLDQNTIVAISVGVVSIAAGIGIPVFYESQIDNAAKRDNTQPCFPCSGSG 99

Query: 123 AQKCRFCVGSGNVTVELGGDEKEVSLCINCDGAGSLT 13
           AQKCRFC+G+G+VTVELGGDEKEVS CINCDG GSLT
Sbjct: 100 AQKCRFCLGTGSVTVELGGDEKEVSRCINCDGIGSLT 136


>gb|ABK96403.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 159

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/97 (70%), Positives = 78/97 (80%)
 Frame = -1

Query: 303 PTSYPCIKALELDQNTXXXXXXXXXXXXXXXXIPVFYESQIDNASKRENTQPCFPCNGTG 124
           P SYPCI+A++LDQNT                IPVFYESQIDNA+KR+NTQPCFPC+G+G
Sbjct: 40  PVSYPCIRAIDLDQNTIVAISVGVVSIAAGIGIPVFYESQIDNAAKRDNTQPCFPCSGSG 99

Query: 123 AQKCRFCVGSGNVTVELGGDEKEVSLCINCDGAGSLT 13
           AQKCRFC+G+G+VTVELGGDEKEVS CINCDG GSLT
Sbjct: 100 AQKCRFCLGTGSVTVELGGDEKEVSRCINCDGIGSLT 136


>ref|XP_002510519.1| conserved hypothetical protein [Ricinus communis]
           gi|223551220|gb|EEF52706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/96 (69%), Positives = 78/96 (81%)
 Frame = -1

Query: 300 TSYPCIKALELDQNTXXXXXXXXXXXXXXXXIPVFYESQIDNASKRENTQPCFPCNGTGA 121
           +SYPCI+A++LDQNT                IPVFYE+QIDNA+KRENTQPCFPCNG+GA
Sbjct: 38  SSYPCIRAIDLDQNTVVAISVGVVSIAIGIGIPVFYETQIDNAAKRENTQPCFPCNGSGA 97

Query: 120 QKCRFCVGSGNVTVELGGDEKEVSLCINCDGAGSLT 13
           Q+CRFC G+G+VTVELGG+EKEVS CINCDGAGSLT
Sbjct: 98  QRCRFCTGTGSVTVELGGEEKEVSRCINCDGAGSLT 133


>ref|XP_003550421.1| PREDICTED: uncharacterized protein LOC100815666 [Glycine max]
          Length = 155

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/97 (71%), Positives = 77/97 (79%)
 Frame = -1

Query: 303 PTSYPCIKALELDQNTXXXXXXXXXXXXXXXXIPVFYESQIDNASKRENTQPCFPCNGTG 124
           PTSYP I+AL+LDQNT                IPVFYE+QIDNA+KRENTQPCFPCNG+G
Sbjct: 36  PTSYPRIRALDLDQNTVVAISVGVVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCNGSG 95

Query: 123 AQKCRFCVGSGNVTVELGGDEKEVSLCINCDGAGSLT 13
           AQKCRFC+G+GNVTVELGG E+EVS CINCDG GSLT
Sbjct: 96  AQKCRFCLGNGNVTVELGGGEEEVSRCINCDGVGSLT 132


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