BLASTX nr result

ID: Coptis24_contig00032644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032644
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB18636.1| CESA7 [Gossypium hirsutum]                             134   4e-56
gb|AGE09566.1| cellulose synthase-like protein [Eucalyptus clado...   135   7e-56
dbj|BAF93202.1| cellulose synthase catalytic subunit [Eucalyptus...   135   7e-56
gb|AAY60845.1| cellulose synthase 3 [Eucalyptus grandis]              135   7e-56
gb|AEK31217.1| cellulose synthase A [Eucalyptus camaldulensis]        135   7e-56

>gb|AFB18636.1| CESA7 [Gossypium hirsutum]
          Length = 1042

 Score =  134 bits (336), Expect(2) = 4e-56
 Identities = 63/66 (95%), Positives = 66/66 (100%)
 Frame = -2

Query: 198 SETAEFARKWVPFCKKFSIEPRAPEMYFSLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 19
           SETAEFARKWVPFCKKF+IEPRAPEMYF+LK+DYLKDKVQPTFVKERRAMKREYEEFKVR
Sbjct: 385 SETAEFARKWVPFCKKFAIEPRAPEMYFTLKVDYLKDKVQPTFVKERRAMKREYEEFKVR 444

Query: 18  INALVA 1
           INALVA
Sbjct: 445 INALVA 450



 Score =  109 bits (272), Expect(2) = 4e-56
 Identities = 52/56 (92%), Positives = 56/56 (100%)
 Frame = -1

Query: 418 IFVSTVDPLKEPPLVTANTLLSILAMDYPVDKVSCYLSDDGASMLTFESLSETAEF 251
           IFVSTVDP+KEPPLVTANT+LSILAMDYPVDK+SCY+SDDGASMLTFESLSETAEF
Sbjct: 335 IFVSTVDPMKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMLTFESLSETAEF 390


>gb|AGE09566.1| cellulose synthase-like protein [Eucalyptus cladocalyx]
          Length = 1041

 Score =  135 bits (340), Expect(2) = 7e-56
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 198 SETAEFARKWVPFCKKFSIEPRAPEMYFSLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 19
           SETAEFARKWVPFCKKFSIEPRAPEMYF+LKIDYLKDKVQPTFVKERRAMKREYEEFKVR
Sbjct: 384 SETAEFARKWVPFCKKFSIEPRAPEMYFTLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 443

Query: 18  INALVA 1
           INALVA
Sbjct: 444 INALVA 449



 Score =  107 bits (266), Expect(2) = 7e-56
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 418 IFVSTVDPLKEPPLVTANTLLSILAMDYPVDKVSCYLSDDGASMLTFESLSETAEF 251
           +FVSTVDP+KEPPLVT NT+LSILAMDYPVDK+SCY+SDDGASMLTFESLSETAEF
Sbjct: 334 VFVSTVDPMKEPPLVTGNTVLSILAMDYPVDKISCYVSDDGASMLTFESLSETAEF 389


>dbj|BAF93202.1| cellulose synthase catalytic subunit [Eucalyptus globulus]
           gi|261876365|dbj|BAI47542.1| cellulose synthase
           catalytic subunit [Eucalyptus globulus subsp. globulus]
          Length = 1041

 Score =  135 bits (340), Expect(2) = 7e-56
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 198 SETAEFARKWVPFCKKFSIEPRAPEMYFSLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 19
           SETAEFARKWVPFCKKFSIEPRAPEMYF+LKIDYLKDKVQPTFVKERRAMKREYEEFKVR
Sbjct: 383 SETAEFARKWVPFCKKFSIEPRAPEMYFTLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 442

Query: 18  INALVA 1
           INALVA
Sbjct: 443 INALVA 448



 Score =  107 bits (266), Expect(2) = 7e-56
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 418 IFVSTVDPLKEPPLVTANTLLSILAMDYPVDKVSCYLSDDGASMLTFESLSETAEF 251
           +FVSTVDP+KEPPLVT NT+LSILAMDYPVDK+SCY+SDDGASMLTFESLSETAEF
Sbjct: 333 VFVSTVDPMKEPPLVTGNTVLSILAMDYPVDKISCYVSDDGASMLTFESLSETAEF 388


>gb|AAY60845.1| cellulose synthase 3 [Eucalyptus grandis]
          Length = 1040

 Score =  135 bits (340), Expect(2) = 7e-56
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 198 SETAEFARKWVPFCKKFSIEPRAPEMYFSLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 19
           SETAEFARKWVPFCKKFSIEPRAPEMYF+LKIDYLKDKVQPTFVKERRAMKREYEEFKVR
Sbjct: 383 SETAEFARKWVPFCKKFSIEPRAPEMYFTLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 442

Query: 18  INALVA 1
           INALVA
Sbjct: 443 INALVA 448



 Score =  107 bits (266), Expect(2) = 7e-56
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 418 IFVSTVDPLKEPPLVTANTLLSILAMDYPVDKVSCYLSDDGASMLTFESLSETAEF 251
           +FVSTVDP+KEPPLVT NT+LSILAMDYPVDK+SCY+SDDGASMLTFESLSETAEF
Sbjct: 333 VFVSTVDPMKEPPLVTGNTVLSILAMDYPVDKISCYVSDDGASMLTFESLSETAEF 388


>gb|AEK31217.1| cellulose synthase A [Eucalyptus camaldulensis]
          Length = 1040

 Score =  135 bits (340), Expect(2) = 7e-56
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 198 SETAEFARKWVPFCKKFSIEPRAPEMYFSLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 19
           SETAEFARKWVPFCKKFSIEPRAPEMYF+LKIDYLKDKVQPTFVKERRAMKREYEEFKVR
Sbjct: 383 SETAEFARKWVPFCKKFSIEPRAPEMYFTLKIDYLKDKVQPTFVKERRAMKREYEEFKVR 442

Query: 18  INALVA 1
           INALVA
Sbjct: 443 INALVA 448



 Score =  107 bits (266), Expect(2) = 7e-56
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 418 IFVSTVDPLKEPPLVTANTLLSILAMDYPVDKVSCYLSDDGASMLTFESLSETAEF 251
           +FVSTVDP+KEPPLVT NT+LSILAMDYPVDK+SCY+SDDGASMLTFESLSETAEF
Sbjct: 333 VFVSTVDPMKEPPLVTGNTVLSILAMDYPVDKISCYVSDDGASMLTFESLSETAEF 388


Top