BLASTX nr result

ID: Coptis24_contig00032590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032590
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301542.1| predicted protein [Populus trichocarpa] gi|2...   285   8e-75
ref|XP_002273071.2| PREDICTED: uncharacterized protein LOC100257...   281   8e-74
emb|CBI37016.3| unnamed protein product [Vitis vinifera]              281   8e-74
ref|XP_002515207.1| nucleotide binding protein, putative [Ricinu...   273   3e-71
ref|XP_003553679.1| PREDICTED: uncharacterized protein LOC100780...   253   4e-65

>ref|XP_002301542.1| predicted protein [Populus trichocarpa] gi|222843268|gb|EEE80815.1|
            predicted protein [Populus trichocarpa]
          Length = 1455

 Score =  285 bits (729), Expect = 8e-75
 Identities = 145/251 (57%), Positives = 178/251 (70%), Gaps = 1/251 (0%)
 Frame = -3

Query: 752  WTELVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXCA 573
            WT+L  +SE++PIVCMD LS+ +   S  ++DWVA+GDGKGN                  
Sbjct: 514  WTKLAQLSEEVPIVCMDLLSKKLPKHSNGVDDWVALGDGKGNMTIVRIMGDVFTPEVGFT 573

Query: 572  FTWSAGMERQLLGIFWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTA 393
             TWSAG ERQLLG +WCK LG  +IFTADPRGILKLW    PL SG      +F A L A
Sbjct: 574  VTWSAGKERQLLGTYWCKALGCRFIFTADPRGILKLWRLSDPLPSGSLTYGRTFDASLIA 633

Query: 392  EFTSCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLTTS-IASEIKISPINIFKG 216
            EFTSCFG RIMCLDASF+ +VL+CGD RGNL++F LS+GLL       EIKISP+  FKG
Sbjct: 634  EFTSCFGIRIMCLDASFEDEVLVCGDLRGNLVLFPLSKGLLLDKPTLPEIKISPLCYFKG 693

Query: 215  AHGISSVTSILVSPITSNQVEVRSTGGDGCVCYFRYDGDWRSLEFTGMKQVKELSLIQSV 36
            +HGIS+V++I V+ + S+ +E+RSTGGDGC+CY  YD D R LEF GMKQVKELSL+QSV
Sbjct: 694  SHGISTVSNISVAKL-SDTIEIRSTGGDGCICYLEYDPDQRGLEFIGMKQVKELSLVQSV 752

Query: 35   TSDVNSDEDLA 3
            ++D N  +DLA
Sbjct: 753  SADNNCLDDLA 763


>ref|XP_002273071.2| PREDICTED: uncharacterized protein LOC100257191 [Vitis vinifera]
          Length = 1404

 Score =  281 bits (720), Expect = 8e-74
 Identities = 141/256 (55%), Positives = 175/256 (68%), Gaps = 1/256 (0%)
 Frame = -3

Query: 770  DAANPIWTELVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXX 591
            D  +  WTEL+ VSE++PIVCMD LSR     S+ +EDW+AVGDGKGN            
Sbjct: 454  DTGDVKWTELIRVSEEVPIVCMDLLSRNGPKLSSGVEDWIAVGDGKGNMTVTGIVSDLCP 513

Query: 590  XXXXCAFTWSAGMERQLLGIFWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSF 411
                  +TWSAG+ERQLLG FWCK LG  YIFTADPRG LKLW  C P  S    +  S 
Sbjct: 514  PKVGLTYTWSAGIERQLLGTFWCKSLGYRYIFTADPRGKLKLWRLCNPSQSASQNSAISN 573

Query: 410  KALLTAEFTSCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLT-TSIASEIKISP 234
               L AEF S F  RIMCLDAS + +VLICGD RGNLI++ L R +L  +S  SE+KI+P
Sbjct: 574  NVSLIAEFISSFNIRIMCLDASSEEEVLICGDLRGNLILYPLLRSILVGSSFGSEVKITP 633

Query: 233  INIFKGAHGISSVTSILVSPITSNQVEVRSTGGDGCVCYFRYDGDWRSLEFTGMKQVKEL 54
            +  FKGAHGISSV+ I ++   SNQ+E++STGGDGC+CY  Y  D ++L+F GMK+VKEL
Sbjct: 634  LTYFKGAHGISSVSGISIAGFVSNQIEIQSTGGDGCICYLEYRRDRQNLQFIGMKRVKEL 693

Query: 53   SLIQSVTSDVNSDEDL 6
            SL+QSV+S  +S +DL
Sbjct: 694  SLVQSVSSGADSVDDL 709


>emb|CBI37016.3| unnamed protein product [Vitis vinifera]
          Length = 1324

 Score =  281 bits (720), Expect = 8e-74
 Identities = 141/256 (55%), Positives = 175/256 (68%), Gaps = 1/256 (0%)
 Frame = -3

Query: 770  DAANPIWTELVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXX 591
            D  +  WTEL+ VSE++PIVCMD LSR     S+ +EDW+AVGDGKGN            
Sbjct: 433  DTGDVKWTELIRVSEEVPIVCMDLLSRNGPKLSSGVEDWIAVGDGKGNMTVTGIVSDLCP 492

Query: 590  XXXXCAFTWSAGMERQLLGIFWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSF 411
                  +TWSAG+ERQLLG FWCK LG  YIFTADPRG LKLW  C P  S    +  S 
Sbjct: 493  PKVGLTYTWSAGIERQLLGTFWCKSLGYRYIFTADPRGKLKLWRLCNPSQSASQNSAISN 552

Query: 410  KALLTAEFTSCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLT-TSIASEIKISP 234
               L AEF S F  RIMCLDAS + +VLICGD RGNLI++ L R +L  +S  SE+KI+P
Sbjct: 553  NVSLIAEFISSFNIRIMCLDASSEEEVLICGDLRGNLILYPLLRSILVGSSFGSEVKITP 612

Query: 233  INIFKGAHGISSVTSILVSPITSNQVEVRSTGGDGCVCYFRYDGDWRSLEFTGMKQVKEL 54
            +  FKGAHGISSV+ I ++   SNQ+E++STGGDGC+CY  Y  D ++L+F GMK+VKEL
Sbjct: 613  LTYFKGAHGISSVSGISIAGFVSNQIEIQSTGGDGCICYLEYRRDRQNLQFIGMKRVKEL 672

Query: 53   SLIQSVTSDVNSDEDL 6
            SL+QSV+S  +S +DL
Sbjct: 673  SLVQSVSSGADSVDDL 688


>ref|XP_002515207.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223545687|gb|EEF47191.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 1385

 Score =  273 bits (698), Expect = 3e-71
 Identities = 140/251 (55%), Positives = 174/251 (69%), Gaps = 1/251 (0%)
 Frame = -3

Query: 752  WTELVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXCA 573
            WT+LV VSE +PIVCMD LS+ +   S  ++DWVA+GDGKGN                  
Sbjct: 449  WTKLVQVSEKVPIVCMDLLSKNLPRHSYGVDDWVALGDGKGNLTIVRVAGVVCTLDNNFT 508

Query: 572  FTWSAGMERQLLGIFWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTA 393
             TWSA  ERQLLG +WCK LG  +IFTADPRG+LK+W    PL      +   F   L A
Sbjct: 509  ITWSAEKERQLLGTYWCKALGNRFIFTADPRGVLKIWKLPDPLLPVPHISARMFDVSLVA 568

Query: 392  EFTSCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLTTSIASEI-KISPINIFKG 216
            EF+SCFG RIMCLDAS   +VL+CGD RGNL+++ L++GLL  S A  + KISP++ FKG
Sbjct: 569  EFSSCFGNRIMCLDASSSNEVLVCGDLRGNLVLYPLTKGLLLDSPAGTVTKISPLSYFKG 628

Query: 215  AHGISSVTSILVSPITSNQVEVRSTGGDGCVCYFRYDGDWRSLEFTGMKQVKELSLIQSV 36
            AHGISSV+SI VS ++S++ E+ STG DGC+CYF YD D +SLEF GMKQVKELSLIQSV
Sbjct: 629  AHGISSVSSISVSTLSSSETEICSTGADGCICYFEYDQDQKSLEFIGMKQVKELSLIQSV 688

Query: 35   TSDVNSDEDLA 3
            +++ NS  D A
Sbjct: 689  SANNNSLYDSA 699


>ref|XP_003553679.1| PREDICTED: uncharacterized protein LOC100780968 [Glycine max]
          Length = 1377

 Score =  253 bits (645), Expect = 4e-65
 Identities = 128/257 (49%), Positives = 162/257 (63%), Gaps = 1/257 (0%)
 Frame = -3

Query: 770  DAANPIWTELVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXX 591
            D     W +LV VS   PI+CMD LS+   +     EDW+A+GDGKGN            
Sbjct: 428  DTGGAQWNQLVQVSNGAPIICMDLLSKDSFELDCGAEDWIAIGDGKGNMTVIGVSNDDCT 487

Query: 590  XXXXCAFTWSAGMERQLLGIFWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSF 411
                  FTW A MERQLLG +WCK LG  Y+FTADPRG LKLW    P  S    +M S 
Sbjct: 488  PTVRLCFTWPAEMERQLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPSQSDLPSSMRSN 547

Query: 410  KALLTAEFTSCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGL-LTTSIASEIKISP 234
                 AEFTS +G RIMCLDA  + +VL CGD RGN+++F L + L L  S A E+KI P
Sbjct: 548  NVSCIAEFTSNYGMRIMCLDACMEEEVLACGDVRGNMVLFPLLKNLVLGISAAQEMKIPP 607

Query: 233  INIFKGAHGISSVTSILVSPITSNQVEVRSTGGDGCVCYFRYDGDWRSLEFTGMKQVKEL 54
            +N FKG HGISSV+S+ V+ +  NQ+E+ STG DGC+CY  +D + ++L+FTGMKQVK L
Sbjct: 608  VNHFKGVHGISSVSSVSVTKLGYNQIEICSTGADGCICYLEFDKEMQNLQFTGMKQVKGL 667

Query: 53   SLIQSVTSDVNSDEDLA 3
            SLI+ V+ D NS + L+
Sbjct: 668  SLIEYVSVDNNSGDKLS 684


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