BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032565
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38188.3| unnamed protein product [Vitis vinifera]              143   2e-32
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]   143   2e-32
ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...   123   2e-26
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ...   103   1e-20

>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/97 (71%), Positives = 79/97 (81%)
 Frame = -2

Query: 293 QNCTRNYNIMKGKSVHCDIIKRGGCLDLFAWNIVLNMFVKLNCLGDACVLFDEMHERNTI 114
           Q+C +     +GK +HC+I+KRGGCLDLFAWNI+LNM+VK + L DA  LFDEM ERNTI
Sbjct: 46  QDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTI 105

Query: 113 SFVTLIQGYVQSCRFSEGIELFVRLCREGHELNPFVF 3
           SFVTLIQGY +S RF E IELFVRL REGHELNPFVF
Sbjct: 106 SFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVF 142


>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/97 (71%), Positives = 79/97 (81%)
 Frame = -2

Query: 293 QNCTRNYNIMKGKSVHCDIIKRGGCLDLFAWNIVLNMFVKLNCLGDACVLFDEMHERNTI 114
           Q+C +     +GK +HC+I+KRGGCLDLFAWNI+LNM+VK + L DA  LFDEM ERNTI
Sbjct: 46  QDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTI 105

Query: 113 SFVTLIQGYVQSCRFSEGIELFVRLCREGHELNPFVF 3
           SFVTLIQGY +S RF E IELFVRL REGHELNPFVF
Sbjct: 106 SFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVF 142


>ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|222842084|gb|EEE79631.1|
           predicted protein [Populus trichocarpa]
          Length = 820

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/97 (65%), Positives = 74/97 (76%)
 Frame = -2

Query: 293 QNCTRNYNIMKGKSVHCDIIKRGGCLDLFAWNIVLNMFVKLNCLGDACVLFDEMHERNTI 114
           Q+C RN +   GK +HC+IIK+G CLDLFA NI+LN +VK + L DA  LFDEM +RNT+
Sbjct: 52  QSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTV 111

Query: 113 SFVTLIQGYVQSCRFSEGIELFVRLCREGHELNPFVF 3
           SFVTLIQGY Q  RFSE I LF RL  EGHELNPFVF
Sbjct: 112 SFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVF 148


>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/88 (68%), Positives = 70/88 (79%)
 Frame = -2

Query: 293 QNCTRNYNIMKGKSVHCDIIKRGGCLDLFAWNIVLNMFVKLNCLGDACVLFDEMHERNTI 114
           Q+C +     +GK +HC+I+KRGGCLDLFAWNI+LNM+VK + L DA  LFDEM ERNTI
Sbjct: 46  QDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTI 105

Query: 113 SFVTLIQGYVQSCRFSEGIELFVRLCRE 30
           SFVTLIQGY +S RF E IELFVRL RE
Sbjct: 106 SFVTLIQGYAESVRFLEAIELFVRLHRE 133


>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519143|gb|AET00767.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/86 (56%), Positives = 63/86 (73%)
 Frame = -2

Query: 260 GKSVHCDIIKRGGCLDLFAWNIVLNMFVKLNCLGDACVLFDEMHERNTISFVTLIQGYVQ 81
           GK +HC I+KRG  LDLFA NI+LN +V+ N L DA  LFDEM + NTISFVTL QGY +
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 80  SCRFSEGIELFVRLCREGHELNPFVF 3
             +F + +   +R+ +EGHE+NPFVF
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVF 139