BLASTX nr result

ID: Coptis24_contig00032558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032558
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trich...   102   4e-20
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...    98   6e-19
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...    98   6e-19
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...    96   4e-18

>ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839772|gb|EEE78095.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1005

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/144 (39%), Positives = 77/144 (53%)
 Frame = +2

Query: 2    KGCSRCENLPPLGQLPLLKVLYINGMDSLKCIRNDFYGEGSVKGFPSLERLYLKKLCSLE 181
            + C  CE+LPP G+L  LK L +  MD++KCI ++ YG+G    FPSLERL L  + +LE
Sbjct: 742  ESCMNCEHLPPFGKLRFLKHLQLKRMDTVKCIGSEMYGDGE-NPFPSLERLTLGPMMNLE 800

Query: 182  EWYPSNENEREWLFPRLESMIIKDCPKLESFPFLPCVKHLALRSCKETIVXXXXXXXXXX 361
            EW  +    RE +F  L+ + I+ CPKL   P +P VKHL +  C  T++          
Sbjct: 801  EWETNTMGGRE-IFTCLDELQIRKCPKLVELPIIPSVKHLTIEDCTVTLLRSVVNFTSIT 859

Query: 362  XXVIYLIAELTFFPKGSLCNLTAL 433
               I    EL   P G L N T L
Sbjct: 860  YLRIEGFDELAVLPDGLLQNHTCL 883


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/142 (37%), Positives = 77/142 (54%)
 Frame = +2

Query: 8    CSRCENLPPLGQLPLLKVLYINGMDSLKCIRNDFYGEGSVKGFPSLERLYLKKLCSLEEW 187
            C+ C+ LPPLGQLP LK L I+ M  L+ I  +FYGEG +KGFPSL+ L L+ +  L++W
Sbjct: 782  CNHCKTLPPLGQLPFLKSLTISMMQELESIGREFYGEGKIKGFPSLKILKLEDMIRLKKW 841

Query: 188  YPSNENEREWLFPRLESMIIKDCPKLESFPFLPCVKHLALRSCKETIVXXXXXXXXXXXX 367
               ++ E    FP L+ + + +CP + + P  P ++ L L +C ET++            
Sbjct: 842  QEIDQGE----FPVLQQLALLNCPNVINLPRFPALEDLLLDNCHETVLSSVHFLISVSSL 897

Query: 368  VIYLIAELTFFPKGSLCNLTAL 433
             I         PKG L  L AL
Sbjct: 898  KILNFRLTDMLPKGFLQPLAAL 919


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/142 (38%), Positives = 76/142 (53%)
 Frame = +2

Query: 8    CSRCENLPPLGQLPLLKVLYINGMDSLKCIRNDFYGEGSVKGFPSLERLYLKKLCSLEEW 187
            C+ C+ LPPLGQLP LK L I  M  ++ I  +FYGEG +KGFPSLE+L L+ + +L+EW
Sbjct: 777  CNYCKTLPPLGQLPSLKSLSIYMMCEVENIGREFYGEGKIKGFPSLEKLKLEDMRNLKEW 836

Query: 188  YPSNENEREWLFPRLESMIIKDCPKLESFPFLPCVKHLALRSCKETIVXXXXXXXXXXXX 367
               +  E    FP+L+ + + +CP + S P  P +  L L  C ETI             
Sbjct: 837  QEIDHGE----FPKLQELAVLNCPNISSLPKFPALCELLLDDCNETIWSSVPLLTSLSSL 892

Query: 368  VIYLIAELTFFPKGSLCNLTAL 433
             I        FP+G    L++L
Sbjct: 893  KISNFRRTEVFPEGLFQALSSL 914


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/144 (38%), Positives = 78/144 (54%)
 Frame = +2

Query: 2   KGCSRCENLPPLGQLPLLKVLYINGMDSLKCIRNDFYGEGSVKGFPSLERLYLKKLCSLE 181
           + C  CE+LPP G+L  LK L +  MD++KCI ++ +G+G    FPSLERL L  + +LE
Sbjct: 154 ESCMNCEHLPPFGKLRFLKHLQLKRMDTVKCIGSEMHGDGE-NPFPSLERLTLGPMMNLE 212

Query: 182 EWYPSNENEREWLFPRLESMIIKDCPKLESFPFLPCVKHLALRSCKETIVXXXXXXXXXX 361
           EW  ++   RE +F  L+ + I+ CPKL   P +P VK+L +  C  T++          
Sbjct: 213 EWETNSMGGRE-IFTCLDELQIRKCPKLVELPIIPSVKYLTIEDCAVTLLRSVVNFTSIT 271

Query: 362 XXVIYLIAELTFFPKGSLCNLTAL 433
              I    EL   P G L N T L
Sbjct: 272 SLRIEGFDELAVLPDGLLQNHTCL 295


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 54/142 (38%), Positives = 75/142 (52%)
 Frame = +2

Query: 8    CSRCENLPPLGQLPLLKVLYINGMDSLKCIRNDFYGEGSVKGFPSLERLYLKKLCSLEEW 187
            C+    LPPLGQLPLLK L I+ M  L+ I  +F GEG ++GFPSLE++ L+ + +L+EW
Sbjct: 775  CTYSRILPPLGQLPLLKYLSIDTMSELESISCEFCGEGQIRGFPSLEKMKLEDMKNLKEW 834

Query: 188  YPSNENEREWLFPRLESMIIKDCPKLESFPFLPCVKHLALRSCKETIVXXXXXXXXXXXX 367
            +   E +    FPRL  + IK+ P   S P  P +  L L  C E I+            
Sbjct: 835  HEIEEGD----FPRLHELTIKNSPNFASLPKFPSLCDLVLDECNEMILGSVQFLSSLSSL 890

Query: 368  VIYLIAELTFFPKGSLCNLTAL 433
             I     L   P+G L +L +L
Sbjct: 891  KISNFRRLALLPEGLLQHLNSL 912


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