BLASTX nr result

ID: Coptis24_contig00032481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032481
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281151.1| PREDICTED: long chain acyl-CoA synthetase 2 ...   339   3e-91
ref|XP_002313075.1| predicted protein [Populus trichocarpa] gi|2...   317   2e-84
ref|XP_004145346.1| PREDICTED: long chain acyl-CoA synthetase 2-...   300   2e-79
ref|XP_003540684.1| PREDICTED: long chain acyl-CoA synthetase 2-...   298   6e-79
ref|XP_004154333.1| PREDICTED: long chain acyl-CoA synthetase 2-...   297   1e-78

>ref|XP_002281151.1| PREDICTED: long chain acyl-CoA synthetase 2 [Vitis vinifera]
           gi|297741400|emb|CBI32531.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  339 bits (869), Expect = 3e-91
 Identities = 159/221 (71%), Positives = 191/221 (86%), Gaps = 1/221 (0%)
 Frame = -1

Query: 671 LESPWELFSHSVEKNPRNQMLGHREVVNGKVSPYLWKTYKEVYDEAILIGSAIRNRGVSP 492
           +ESPWE FS SVE+NP+NQMLG R+++N K  PY+W TY+E YD A+ +GSA+R+RGV+P
Sbjct: 41  MESPWEFFSDSVERNPKNQMLGRRQIINSKAGPYVWLTYREAYDAALRMGSAMRSRGVNP 100

Query: 491 GGRCGIFGTNCPEWIISMEACNSHGIQYVPLYDTLGANAVEFIINHAEVSIAFVQENKIQ 312
           G RCGI+G+NCPEWII+MEACNS  I YVPLYD+LGANAVEFIINHAEVSIAFVQE+KI 
Sbjct: 101 GDRCGIYGSNCPEWIIAMEACNSQAIPYVPLYDSLGANAVEFIINHAEVSIAFVQESKIP 160

Query: 311 AMLTCLPRC-KYLKTIVSFGKIADAQMKEAEEIGVSCFSWKEFASLGTPDDKLSTRTKSD 135
           AMLTCLP+C  YLKTI+SFGKI+ +Q +EAEE+GVSCFSW+EFA LG+ D +L  + K+D
Sbjct: 161 AMLTCLPKCTSYLKTIISFGKISSSQKEEAEELGVSCFSWEEFALLGSLDCELPPKQKTD 220

Query: 134 ICTIMYTSGTTGEPKGVLLSNEAIMEQVFCVDKLLEETDKV 12
           ICTIMYTSGTTGEPKGV+LSNEAIM +V   D+LL ETDKV
Sbjct: 221 ICTIMYTSGTTGEPKGVVLSNEAIMAEVLSTDQLLLETDKV 261


>ref|XP_002313075.1| predicted protein [Populus trichocarpa] gi|222849483|gb|EEE87030.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  317 bits (811), Expect = 2e-84
 Identities = 149/221 (67%), Positives = 184/221 (83%), Gaps = 1/221 (0%)
 Frame = -1

Query: 671 LESPWELFSHSVEKNPRNQMLGHREVVNGKVSPYLWKTYKEVYDEAILIGSAIRNRGVSP 492
           LESPW+ FS S  KNP N+MLG R+V++ KV PY+W TYKEVYD A+ +GSA+R RGV+P
Sbjct: 40  LESPWQFFSDSALKNPENKMLGRRQVIDSKVGPYVWLTYKEVYDSAMRMGSAMRRRGVNP 99

Query: 491 GGRCGIFGTNCPEWIISMEACNSHGIQYVPLYDTLGANAVEFIINHAEVSIAFVQENKIQ 312
           G RCGI+G+NCPEWI +MEAC+S  I YVPLYDTLG NAVEFIINHAEVSIAFVQENK+ 
Sbjct: 100 GDRCGIYGSNCPEWITAMEACDSQAITYVPLYDTLGPNAVEFIINHAEVSIAFVQENKLS 159

Query: 311 AMLTCLPRC-KYLKTIVSFGKIADAQMKEAEEIGVSCFSWKEFASLGTPDDKLSTRTKSD 135
           ++L+CLP+C   LKTIVSFGKI+D Q KEA+E+GVSCFSW+EF  LG+ D +L  + K+D
Sbjct: 160 SILSCLPKCSSNLKTIVSFGKISDMQKKEADELGVSCFSWEEFPQLGSLDCELPPKHKTD 219

Query: 134 ICTIMYTSGTTGEPKGVLLSNEAIMEQVFCVDKLLEETDKV 12
           +CTIMYTSGTTGEPKGV+L+N A++ +V  VD+LL  TD+V
Sbjct: 220 VCTIMYTSGTTGEPKGVILTNGALVAEVLSVDQLLFLTDRV 260


>ref|XP_004145346.1| PREDICTED: long chain acyl-CoA synthetase 2-like [Cucumis sativus]
          Length = 661

 Score =  300 bits (767), Expect = 2e-79
 Identities = 148/223 (66%), Positives = 177/223 (79%), Gaps = 3/223 (1%)
 Frame = -1

Query: 671 LESPWELFSHSVEKNPRNQMLGHREVVNG--KVSPYLWKTYKEVYDEAILIGSAIRNRGV 498
           L+SPW+ FS SV++NP N MLG R+  NG  K   Y+W TY+E YD AI +GSAIR RGV
Sbjct: 42  LQSPWQFFSDSVKRNPGNPMLGRRQT-NGDSKAGSYVWLTYQEAYDAAIRMGSAIRKRGV 100

Query: 497 SPGGRCGIFGTNCPEWIISMEACNSHGIQYVPLYDTLGANAVEFIINHAEVSIAFVQENK 318
           + G RCGI+G+NCPEWIISMEACNS  I YVPLYDTLGANAVEFIINHAEVSIAFVQENK
Sbjct: 101 NSGDRCGIYGSNCPEWIISMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 160

Query: 317 IQAMLTCLPRC-KYLKTIVSFGKIADAQMKEAEEIGVSCFSWKEFASLGTPDDKLSTRTK 141
           + ++ +CLPRC   LKTIVSF  ++    KEAEE+GVSCFSW+EF  LG+ D +L ++ K
Sbjct: 161 LASIFSCLPRCSNQLKTIVSFTNVSSVLKKEAEELGVSCFSWEEFCQLGSLDCELPSKQK 220

Query: 140 SDICTIMYTSGTTGEPKGVLLSNEAIMEQVFCVDKLLEETDKV 12
           +DICTIMYTSGTTGEPKGV+L+N A+M +V  V+ LL  TDKV
Sbjct: 221 TDICTIMYTSGTTGEPKGVILNNTAVMAEVLSVEHLLLLTDKV 263


>ref|XP_003540684.1| PREDICTED: long chain acyl-CoA synthetase 2-like [Glycine max]
          Length = 656

 Score =  298 bits (763), Expect = 6e-79
 Identities = 138/219 (63%), Positives = 170/219 (77%)
 Frame = -1

Query: 668 ESPWELFSHSVEKNPRNQMLGHREVVNGKVSPYLWKTYKEVYDEAILIGSAIRNRGVSPG 489
           ESPWE F  +  + P N MLG R+  + KV PY W TY+E YD AI +GSA+R+R V+PG
Sbjct: 43  ESPWEFFRDTTTRCPSNPMLGRRQKSDSKVGPYEWITYQEAYDAAIRMGSAMRSRDVNPG 102

Query: 488 GRCGIFGTNCPEWIISMEACNSHGIQYVPLYDTLGANAVEFIINHAEVSIAFVQENKIQA 309
            RCGI+G+NCPEWII+MEACNS+ + YVPLYDTLG NAVEFIINHAEVSIAFVQ+NK  +
Sbjct: 103 DRCGIYGSNCPEWIIAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQDNKFPS 162

Query: 308 MLTCLPRCKYLKTIVSFGKIADAQMKEAEEIGVSCFSWKEFASLGTPDDKLSTRTKSDIC 129
           +L+CL RC  LKT+VSFG ++  Q KEAEE+G SCFSW+EF  LG  D  L  + K++IC
Sbjct: 163 VLSCLDRCSSLKTVVSFGNVSTTQKKEAEELGASCFSWEEFLQLGNMDLDLPLKNKTNIC 222

Query: 128 TIMYTSGTTGEPKGVLLSNEAIMEQVFCVDKLLEETDKV 12
           TIMYTSGTTGEPKGV++ NEA M QV  +D++L  TD+V
Sbjct: 223 TIMYTSGTTGEPKGVIIKNEAFMTQVLSIDQILNLTDRV 261


>ref|XP_004154333.1| PREDICTED: long chain acyl-CoA synthetase 2-like [Cucumis sativus]
          Length = 661

 Score =  297 bits (761), Expect = 1e-78
 Identities = 148/223 (66%), Positives = 177/223 (79%), Gaps = 3/223 (1%)
 Frame = -1

Query: 671 LESPWELFSHSVEKNPRNQMLGHREVVNG--KVSPYLWKTYKEVYDEAILIGSAIRNRGV 498
           L+SPW+ FS SV++NP N MLG R+  NG  KV+   W TY+E YD AI +GSAIR RGV
Sbjct: 42  LQSPWQFFSDSVKRNPGNPMLGRRQT-NGDSKVAAIRWLTYQEAYDAAIRMGSAIRKRGV 100

Query: 497 SPGGRCGIFGTNCPEWIISMEACNSHGIQYVPLYDTLGANAVEFIINHAEVSIAFVQENK 318
           + G RCGI+G+NCPEWIISMEACNS  I YVPLYDTLGANAVEFIINHAEVSIAFVQENK
Sbjct: 101 NSGDRCGIYGSNCPEWIISMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 160

Query: 317 IQAMLTCLPRC-KYLKTIVSFGKIADAQMKEAEEIGVSCFSWKEFASLGTPDDKLSTRTK 141
           + ++ +CLPRC   LKTIVSF  ++    KEAEE+GVSCFSW+EF  LG+ D +L ++ K
Sbjct: 161 LASIFSCLPRCSNQLKTIVSFTNVSSVLKKEAEELGVSCFSWEEFCQLGSLDCELPSKQK 220

Query: 140 SDICTIMYTSGTTGEPKGVLLSNEAIMEQVFCVDKLLEETDKV 12
           +DICTIMYTSGTTGEPKGV+L+N A+M +V  V+ LL  TDKV
Sbjct: 221 TDICTIMYTSGTTGEPKGVILNNTAVMAEVLSVEHLLLLTDKV 263


Top