BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032423
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC94893.1| polyprotein [Oryza australiensis]                       58   9e-07
prf||1510387A retrotransposon del1-46                                  56   3e-06
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]     56   3e-06
gb|ADN34141.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    56   4e-06

>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/69 (43%), Positives = 44/69 (63%)
 Frame = +3

Query: 18  LCVETPLGGSVTLYDECKNFKL*FLDHVFVVDLIVLGFEGFHFILGMDWLTRYHVTLDCA 197
           + V +P GG +T+   C N  +   D VF+ +L+VL  +    ILGMDWLT+ +  +DC+
Sbjct: 408 MLVHSP-GGDITVPHACINVPIRIRDVVFLSNLMVLSPQTIDVILGMDWLTKNNGIIDCS 466

Query: 198 RREVIVNTP 224
           RREV V+TP
Sbjct: 467 RREVTVSTP 475


>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 38/70 (54%)
 Frame = +3

Query: 18  LCVETPLGGSVTLYDECKNFKL*FLDHVFVVDLIVLGFEGFHFILGMDWLTRYHVTLDCA 197
           L V +P+G S  +   CK   +   +    VDLI+L  E    +LGMDWL  YHV LDC 
Sbjct: 378 LSVISPIGTSTFVNQVCKGCMITIGNQELTVDLIILDLEDPDILLGMDWLAAYHVVLDCF 437

Query: 198 RREVIVNTPG 227
            ++V  + PG
Sbjct: 438 SKKVTFHLPG 447


>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
          Length = 871

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 38/69 (55%)
 Frame = +3

Query: 18  LCVETPLGGSVTLYDECKNFKL*FLDHVFVVDLIVLGFEGFHFILGMDWLTRYHVTLDCA 197
           L V TP G  +   ++ K  ++    HV  V LIVL    F  ILGMDWL   H ++DC+
Sbjct: 670 LSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCS 729

Query: 198 RREVIVNTP 224
           R+EV  N P
Sbjct: 730 RKEVTFNPP 738


>gb|ADN34141.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1359

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +3

Query: 18  LCVETPLGGSVTLYDECKNFKL*FLDHVFVVDLIVLGFEGFHFILGMDWLTRYHVTLDCA 197
           L V TP G  +   ++ K  ++    HV  V L+VL    F  ILGMDWL   H ++DC+
Sbjct: 325 LSVSTPFGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCS 384

Query: 198 RREVIVNTP 224
           R+E+  N P
Sbjct: 385 RKEIAFNPP 393