BLASTX nr result

ID: Coptis24_contig00032354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032354
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   126   2e-27
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   124   8e-27
gb|AAG51343.1|AC012562_4 hypothetical protein; 82071-85833 [Arab...   104   7e-21

>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/114 (58%), Positives = 85/114 (74%)
 Frame = +2

Query: 2   VCEWGQILAALDSEVGNAEWFDAVFIQLCAIVRDMSVEVRTTAFAALGEMKLVSEDILLQ 181
           V EWGQ+L A   E    +W + VF+QLC++VRDMSVEVR  AF ALG++KLVSEDILLQ
Sbjct: 220 VSEWGQMLIAAKEENDKIDWSNQVFVQLCSMVRDMSVEVRVEAFNALGKIKLVSEDILLQ 279

Query: 182 TLSKKVIGVTKKRKISGLVTSKAFDLPPSNAAGVFVHGLEDEFHEVRTSASISL 343
           T+SKKV+ + K++   G  T++ F++  S+ AG FVHGLEDEFHEVR SA  SL
Sbjct: 280 TISKKVLAIMKEKNSHGQCTAERFEILASSYAGAFVHGLEDEFHEVRKSACNSL 333


>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
 Frame = +2

Query: 2   VCEWGQILAALDSEVGNAEWFDAVFIQLCAIVRDMSVEVRTTAFAALGEMKLVSEDILLQ 181
           V EWG++L A   E+    W DAVF++LC++VRDMS+EVR  AF ALG++ +VSEDILLQ
Sbjct: 224 VSEWGKMLVASVQEMNKRYWSDAVFVRLCSMVRDMSMEVRVAAFDALGKIGVVSEDILLQ 283

Query: 182 TLSKKVIGVTK----------KRKISGLVTSKAFDLPPSNAAGVFVHGLEDEFHEVRTSA 331
           TLSK+V+G+TK          KRK  G    K FD+    AAG FVHGLEDEF+EVR SA
Sbjct: 284 TLSKRVLGITKEKKPLGQCSAKRKSLGQYIPKHFDIQACVAAGAFVHGLEDEFYEVRWSA 343

Query: 332 SISLGKL 352
             SL  L
Sbjct: 344 CHSLHTL 350


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
 Frame = +2

Query: 2   VCEWGQILAALDSEVGNAEWFDAVFIQLCAIVRDMSVEVRTTAFAALGEMKLVSEDILLQ 181
           V EWG++L A   E+    W DAVF++LC++VRDMS+EVR  AF ALG++ +VSEDILLQ
Sbjct: 224 VSEWGKMLVASVQEMNKRYWSDAVFVRLCSMVRDMSMEVRVAAFDALGKIGVVSEDILLQ 283

Query: 182 TLSKKVIGVTK----------KRKISGLVTSKAFDLPPSNAAGVFVHGLEDEFHEVRTSA 331
           TLSK+V+G+TK          KRK  G    K FD+    AAG FVHGLEDEF+EVR SA
Sbjct: 284 TLSKRVLGITKEKKPLGQCSAKRKSLGQYIPKHFDIQACVAAGAFVHGLEDEFYEVRWSA 343

Query: 332 SISLGKL 352
             SL  L
Sbjct: 344 CHSLHTL 350


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/117 (54%), Positives = 86/117 (73%)
 Frame = +2

Query: 2   VCEWGQILAALDSEVGNAEWFDAVFIQLCAIVRDMSVEVRTTAFAALGEMKLVSEDILLQ 181
           V EWG +L A + E    +WFD VF+QLC++VRDMS+ VR  AF+ALG++++VSEDILLQ
Sbjct: 208 VSEWGLMLIAANQEEDKTDWFDTVFLQLCSMVRDMSMGVRVGAFSALGKIQIVSEDILLQ 267

Query: 182 TLSKKVIGVTKKRKISGLVTSKAFDLPPSNAAGVFVHGLEDEFHEVRTSASISLGKL 352
           TLSKKV+ + K++K      ++ F    ++AAG F+HGLEDEF+EVR SA  SL KL
Sbjct: 268 TLSKKVLPIIKEKKSQ---IAERFQSLAASAAGAFMHGLEDEFYEVRKSACYSLRKL 321


>gb|AAG51343.1|AC012562_4 hypothetical protein; 82071-85833 [Arabidopsis thaliana]
          Length = 768

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/118 (47%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   VCEWGQIL-AALDSEVGNAEWFDAVFIQLCAIVRDMSVEVRTTAFAALGEMKLVSEDILL 178
           V  WG+++ A+ + E+   +  DAVF+QLC++VRDMSV+VR   F A G +   SE I+L
Sbjct: 224 VSVWGKVMIASKEEEMNRRDCTDAVFLQLCSVVRDMSVDVRVEVFKAFGIIGTASESIIL 283

Query: 179 QTLSKKVIGVTKKRKISGLVTSKAFDLPPSNAAGVFVHGLEDEFHEVRTSASISLGKL 352
           QTLSKKV+G  K +K   L+++ + D+  S+AAGV++HG EDEF+EVR +A  S   L
Sbjct: 284 QTLSKKVLGAGKGKKPQNLLSNGSADV--SSAAGVYIHGFEDEFYEVREAAVDSFHSL 339


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