BLASTX nr result

ID: Coptis24_contig00032313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032313
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320376.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002320373.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002270442.2| PREDICTED: mitochondrial substrate carrier f...   127   1e-27
emb|CAN71674.1| hypothetical protein VITISV_044359 [Vitis vinifera]   125   3e-27
ref|XP_004158923.1| PREDICTED: mitochondrial substrate carrier f...   122   3e-26

>ref|XP_002320376.1| predicted protein [Populus trichocarpa] gi|222861149|gb|EEE98691.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/86 (73%), Positives = 72/86 (83%)
 Frame = -3

Query: 296 ATALTNPMEVLKVRLQMNPKLGSGGAIREMRLITSEEGIKALWKGVGAAMIRAGALTASQ 117
           ATALTNP+EVLKVRLQMN     GG + EMR I SEEGI+ALWKGVG AM+RA ALTASQ
Sbjct: 113 ATALTNPVEVLKVRLQMNSNQRQGGPMAEMRTIVSEEGIRALWKGVGPAMVRAAALTASQ 172

Query: 116 LATYDESKRALLRLTPLEEGFHLHFI 39
           LATYDE+K+ L+R TPL+EGFHLH +
Sbjct: 173 LATYDETKQVLIRWTPLDEGFHLHLL 198


>ref|XP_002320373.1| predicted protein [Populus trichocarpa] gi|222861146|gb|EEE98688.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/86 (72%), Positives = 72/86 (83%)
 Frame = -3

Query: 296 ATALTNPMEVLKVRLQMNPKLGSGGAIREMRLITSEEGIKALWKGVGAAMIRAGALTASQ 117
           ATALTNP+EVLKVRLQMN     GG + EMR I SEEGI+ALWKG+G AM+RA ALTASQ
Sbjct: 113 ATALTNPVEVLKVRLQMNSNQRQGGPMAEMRTIVSEEGIRALWKGIGPAMVRAAALTASQ 172

Query: 116 LATYDESKRALLRLTPLEEGFHLHFI 39
           LATYDE+K+ L+R TPL+EGFHLH +
Sbjct: 173 LATYDETKQVLIRWTPLDEGFHLHLL 198


>ref|XP_002270442.2| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Vitis vinifera] gi|296086640|emb|CBI32275.3| unnamed
           protein product [Vitis vinifera]
          Length = 311

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/86 (79%), Positives = 72/86 (83%)
 Frame = -3

Query: 296 ATALTNPMEVLKVRLQMNPKLGSGGAIREMRLITSEEGIKALWKGVGAAMIRAGALTASQ 117
           ATALTNPMEVLKVRLQM   L  G AI EM  I SEEGIKALWKGVG AM+RAGALTASQ
Sbjct: 139 ATALTNPMEVLKVRLQMKSNLRRG-AIGEMCKIISEEGIKALWKGVGPAMVRAGALTASQ 197

Query: 116 LATYDESKRALLRLTPLEEGFHLHFI 39
           LATYDE+K+ L+R TPLEEGFHLH I
Sbjct: 198 LATYDETKQILMRWTPLEEGFHLHLI 223


>emb|CAN71674.1| hypothetical protein VITISV_044359 [Vitis vinifera]
          Length = 433

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/86 (77%), Positives = 72/86 (83%)
 Frame = -3

Query: 296 ATALTNPMEVLKVRLQMNPKLGSGGAIREMRLITSEEGIKALWKGVGAAMIRAGALTASQ 117
           ATALTNPMEVLKVRLQM   L  G AI EM  I SEEGIKALWKGVG AM+RAGALTASQ
Sbjct: 205 ATALTNPMEVLKVRLQMKSNLRRG-AIGEMCKIISEEGIKALWKGVGPAMVRAGALTASQ 263

Query: 116 LATYDESKRALLRLTPLEEGFHLHFI 39
           LATYDE+K+ L+R TPLEEGFHLH +
Sbjct: 264 LATYDETKQILMRWTPLEEGFHLHLM 289


>ref|XP_004158923.1| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Cucumis sativus]
          Length = 314

 Score =  122 bits (306), Expect = 3e-26
 Identities = 63/86 (73%), Positives = 72/86 (83%)
 Frame = -3

Query: 296 ATALTNPMEVLKVRLQMNPKLGSGGAIREMRLITSEEGIKALWKGVGAAMIRAGALTASQ 117
           ATALTNP+EVLKVRLQMNP   + G ++EM  I SEEG+KALWKGVG AM RAGALTASQ
Sbjct: 142 ATALTNPVEVLKVRLQMNPN-STKGPMKEMSRIVSEEGLKALWKGVGPAMARAGALTASQ 200

Query: 116 LATYDESKRALLRLTPLEEGFHLHFI 39
           LATYDESK+ L++ TPL+EGF LH I
Sbjct: 201 LATYDESKQLLVKWTPLQEGFSLHLI 226


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