BLASTX nr result
ID: Coptis24_contig00032161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032161 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tpg|DAA54152.1| TPA: hypothetical protein ZEAMMB73_671369 [Zea m... 66 3e-09 ref|NP_001167850.1| putative argonaute family protein [Zea mays]... 66 3e-09 ref|NP_001136873.1| uncharacterized protein LOC100217027 [Zea ma... 66 3e-09 gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana] 60 1e-07 ref|XP_002440386.1| hypothetical protein SORBIDRAFT_09g030910 [S... 60 1e-07 >tpg|DAA54152.1| TPA: hypothetical protein ZEAMMB73_671369 [Zea mays] Length = 471 Score = 66.2 bits (160), Expect = 3e-09 Identities = 32/50 (64%), Positives = 37/50 (74%) Frame = +1 Query: 1 LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150 LAAAQ+GQFIKF+ G T+AG VPVQ+LPRLHE +RSSMFFC Sbjct: 422 LAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 471 >ref|NP_001167850.1| putative argonaute family protein [Zea mays] gi|223944419|gb|ACN26293.1| unknown [Zea mays] gi|413946899|gb|AFW79548.1| putative argonaute family protein [Zea mays] Length = 898 Score = 66.2 bits (160), Expect = 3e-09 Identities = 32/50 (64%), Positives = 37/50 (74%) Frame = +1 Query: 1 LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150 LAAAQ+GQFIKF+ G T+AG VPVQ+LPRLHE +RSSMFFC Sbjct: 849 LAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 898 >ref|NP_001136873.1| uncharacterized protein LOC100217027 [Zea mays] gi|194697434|gb|ACF82801.1| unknown [Zea mays] Length = 391 Score = 66.2 bits (160), Expect = 3e-09 Identities = 32/50 (64%), Positives = 37/50 (74%) Frame = +1 Query: 1 LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150 LAAAQ+GQFIKF+ G T+AG VPVQ+LPRLHE +RSSMFFC Sbjct: 342 LAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 391 >gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana] Length = 912 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/50 (58%), Positives = 35/50 (70%) Frame = +1 Query: 1 LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150 LAA Q+GQ++KFE G+T+AGPV V QLPRL EN+ SSMFFC Sbjct: 863 LAATQVGQWMKFEDASETSSSHGGLTSAGPVTVPQLPRLQENVSSSMFFC 912 >ref|XP_002440386.1| hypothetical protein SORBIDRAFT_09g030910 [Sorghum bicolor] gi|241945671|gb|EES18816.1| hypothetical protein SORBIDRAFT_09g030910 [Sorghum bicolor] Length = 909 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/50 (58%), Positives = 34/50 (68%) Frame = +1 Query: 1 LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150 LAAAQ+G F+KFE G T+AG PV +LPRLHE +RSSMFFC Sbjct: 860 LAAAQVGTFLKFEEMSDTSSSQGGHTSAGSAPVPELPRLHEKVRSSMFFC 909