BLASTX nr result

ID: Coptis24_contig00032161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032161
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA54152.1| TPA: hypothetical protein ZEAMMB73_671369 [Zea m...    66   3e-09
ref|NP_001167850.1| putative argonaute family protein [Zea mays]...    66   3e-09
ref|NP_001136873.1| uncharacterized protein LOC100217027 [Zea ma...    66   3e-09
gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]                 60   1e-07
ref|XP_002440386.1| hypothetical protein SORBIDRAFT_09g030910 [S...    60   1e-07

>tpg|DAA54152.1| TPA: hypothetical protein ZEAMMB73_671369 [Zea mays]
          Length = 471

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +1

Query: 1   LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150
           LAAAQ+GQFIKF+          G T+AG VPVQ+LPRLHE +RSSMFFC
Sbjct: 422 LAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 471


>ref|NP_001167850.1| putative argonaute family protein [Zea mays]
           gi|223944419|gb|ACN26293.1| unknown [Zea mays]
           gi|413946899|gb|AFW79548.1| putative argonaute family
           protein [Zea mays]
          Length = 898

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +1

Query: 1   LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150
           LAAAQ+GQFIKF+          G T+AG VPVQ+LPRLHE +RSSMFFC
Sbjct: 849 LAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 898


>ref|NP_001136873.1| uncharacterized protein LOC100217027 [Zea mays]
           gi|194697434|gb|ACF82801.1| unknown [Zea mays]
          Length = 391

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +1

Query: 1   LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150
           LAAAQ+GQFIKF+          G T+AG VPVQ+LPRLHE +RSSMFFC
Sbjct: 342 LAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 391


>gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]
          Length = 912

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = +1

Query: 1    LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150
            LAA Q+GQ++KFE          G+T+AGPV V QLPRL EN+ SSMFFC
Sbjct: 863  LAATQVGQWMKFEDASETSSSHGGLTSAGPVTVPQLPRLQENVSSSMFFC 912


>ref|XP_002440386.1| hypothetical protein SORBIDRAFT_09g030910 [Sorghum bicolor]
            gi|241945671|gb|EES18816.1| hypothetical protein
            SORBIDRAFT_09g030910 [Sorghum bicolor]
          Length = 909

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +1

Query: 1    LAAAQMGQFIKFEXXXXXXXXXHGITAAGPVPVQQLPRLHENIRSSMFFC 150
            LAAAQ+G F+KFE          G T+AG  PV +LPRLHE +RSSMFFC
Sbjct: 860  LAAAQVGTFLKFEEMSDTSSSQGGHTSAGSAPVPELPRLHEKVRSSMFFC 909


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