BLASTX nr result

ID: Coptis24_contig00032112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032112
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]            110   2e-22
ref|NP_001233764.1| TAGL12 transcription factor [Solanum lycoper...   104   6e-21
ref|XP_002526423.1| mads box protein, putative [Ricinus communis...   103   1e-20
dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS...   102   3e-20
ref|XP_002327290.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]
          Length = 234

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 34/136 (25%)
 Frame = -1

Query: 306 LKKAKELSILCDADIGVIIFSNHGKLYELSTKGTI------------------------- 202
           LKKAKELSILCDAD+GVIIFSN+GKLY+LSTKG++                         
Sbjct: 29  LKKAKELSILCDADVGVIIFSNNGKLYDLSTKGSLFQPILSLVFITFSYYYSKLDLIVVF 88

Query: 201 ---------EELIERYMLQTAKGVQVSEEETNQPMEAEEEIAMLKQEIQLLQKXXXXXXX 49
                    + L+ERYM ++AKG QVS+E+ NQ  E+EEEIAMLKQEIQLLQK       
Sbjct: 89  VQLYSQRSMQGLVERYM-KSAKGAQVSDEDANQSSESEEEIAMLKQEIQLLQKGLRYTFG 147

Query: 48  XXXXXXTLNELNLLEK 1
                 T++EL+LLEK
Sbjct: 148 GGSGNMTVDELDLLEK 163


>ref|NP_001233764.1| TAGL12 transcription factor [Solanum lycopersicum]
           gi|24967140|gb|AAM33103.2| TAGL12 transcription factor
           [Solanum lycopersicum]
          Length = 201

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/103 (55%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
 Frame = -1

Query: 306 LKKAKELSILCDADIGVIIFSNHGKLYELSTKGTIEELIERYMLQTAKGVQVSEE-ETNQ 130
           LKKAKELS+LCDA++G+ IFS HGKLYEL+TKG+++ LIERY +++ KGV+V+EE +  Q
Sbjct: 29  LKKAKELSVLCDAEVGLFIFSAHGKLYELATKGSMQGLIERY-IKSTKGVEVAEEAKDTQ 87

Query: 129 PMEAEEEIAMLKQEIQLLQKXXXXXXXXXXXXXTLNELNLLEK 1
           P++ +EEI MLK EI +LQK             TL+EL+ LEK
Sbjct: 88  PLDPKEEINMLKNEIDVLQKGLSYMYGGGAGTMTLDELHSLEK 130


>ref|XP_002526423.1| mads box protein, putative [Ricinus communis]
           gi|223534285|gb|EEF35999.1| mads box protein, putative
           [Ricinus communis]
          Length = 205

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 4/106 (3%)
 Frame = -1

Query: 306 LKKAKELSILCDADIGVIIFSNHGKLYELSTKGTIEELIERYMLQTA----KGVQVSEEE 139
           LKKAKELS+LCDA+IG+ IFS HGKLY+L+TKGT+  LIERYM  T     +    ++E 
Sbjct: 29  LKKAKELSVLCDAEIGLFIFSAHGKLYDLATKGTMSGLIERYMNATGGNSLQAEDKAKET 88

Query: 138 TNQPMEAEEEIAMLKQEIQLLQKXXXXXXXXXXXXXTLNELNLLEK 1
             QP++A+EEI+MLKQEI++LQK             TL+EL +LEK
Sbjct: 89  MQQPLDAKEEISMLKQEIEILQKGLRHLLGGGAAEMTLDELLILEK 134


>dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS5 [Magnolia
           praecocissima]
          Length = 204

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/102 (51%), Positives = 72/102 (70%)
 Frame = -1

Query: 306 LKKAKELSILCDADIGVIIFSNHGKLYELSTKGTIEELIERYMLQTAKGVQVSEEETNQP 127
           LKKA+  S+LCD DIG++IFS HGKLYEL+TKGT+E LIERY L T++G Q+      +P
Sbjct: 29  LKKARXXSVLCDVDIGLMIFSTHGKLYELATKGTMEGLIERY-LGTSRGAQIEGGPAXZP 87

Query: 126 MEAEEEIAMLKQEIQLLQKXXXXXXXXXXXXXTLNELNLLEK 1
            E+++E+ MLKQEI+LLQK             T++EL+ LE+
Sbjct: 88  PESDQEVFMLKQEIELLQKGLRNSIGGGMGNMTMDELHALER 129


>ref|XP_002327290.1| predicted protein [Populus trichocarpa] gi|222835660|gb|EEE74095.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  101 bits (251), Expect = 7e-20
 Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
 Frame = -1

Query: 306 LKKAKELSILCDADIGVIIFSNHGKLYELSTKGTIEELIERYMLQTAKGVQVSEE--ETN 133
           LKKAKELS+LCDA+IGV IFS HGKLYEL+TKGT++ LIERYM ++++G Q      ET 
Sbjct: 29  LKKAKELSVLCDAEIGVFIFSAHGKLYELATKGTMQGLIERYM-KSSRGTQPEPAAIETQ 87

Query: 132 QPMEAEEEIAMLKQEIQLLQKXXXXXXXXXXXXXTLNELNLLEK 1
             M+ +EEI MLKQEI++LQK             TL+EL  LEK
Sbjct: 88  PDMDVKEEINMLKQEIEILQKGLRYMFGGRAAEMTLDELIELEK 131


Top