BLASTX nr result

ID: Coptis24_contig00032080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032080
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic...    68   7e-10
gb|AGA60119.1| threonine synthase [Lens culinaris]                     67   2e-09
ref|XP_003597553.1| Threonine synthase [Medicago truncatula] gi|...    65   8e-09
ref|XP_003542066.1| PREDICTED: threonine synthase, chloroplastic...    64   2e-08
sp|Q9MT28.1|THRC_SOLTU RecName: Full=Threonine synthase, chlorop...    63   2e-08

>ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic [Vitis vinifera]
          Length = 522

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 12/70 (17%)
 Frame = +3

Query: 117 ERASPSISSDNHAFSARFVPFNADPSCNQSYSLD------------DIKYNIEALKKFDA 260
           + A    S ++H FSA +VPFNADPS  +SYSLD            D+ ++++ALKK+D 
Sbjct: 62  DEARRQSSGNHHGFSAVYVPFNADPSSTESYSLDEIVYRSRSGGLLDVSHDLDALKKYDG 121

Query: 261 QYWKTLFNSR 290
           QYW++LF+SR
Sbjct: 122 QYWRSLFDSR 131


>gb|AGA60119.1| threonine synthase [Lens culinaris]
          Length = 537

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 12/64 (18%)
 Frame = +3

Query: 135 ISSDNHAFSARFVPFNADPSCNQSYSLD------------DIKYNIEALKKFDAQYWKTL 278
           I+   H FSA++VPFNADPS  +SYSLD            D++++++ALKKFD  YW+ L
Sbjct: 82  INVSQHLFSAKYVPFNADPSSTESYSLDEIVYRSQSGGLLDVQHDLDALKKFDGAYWRNL 141

Query: 279 FNSR 290
           F+SR
Sbjct: 142 FDSR 145


>ref|XP_003597553.1| Threonine synthase [Medicago truncatula]
           gi|355486601|gb|AES67804.1| Threonine synthase [Medicago
           truncatula]
          Length = 532

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 12/59 (20%)
 Frame = +3

Query: 150 HAFSARFVPFNADPSCNQSYSLD------------DIKYNIEALKKFDAQYWKTLFNSR 290
           H FSA++VPFNADPS  +SYSLD            D+++++ ALKKFD  YW+ LF+SR
Sbjct: 82  HLFSAKYVPFNADPSSTESYSLDEIVYRSQSGDLLDVQHDLTALKKFDGAYWRNLFDSR 140


>ref|XP_003542066.1| PREDICTED: threonine synthase, chloroplastic-like [Glycine max]
          Length = 521

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 14/63 (22%)
 Frame = +3

Query: 144 DNHAFSARFVPFNADPSCN--QSYSLD------------DIKYNIEALKKFDAQYWKTLF 281
           D+H FSA++VPFNADPS +  +SYSLD            D++++++ALK+FD +YW+ LF
Sbjct: 70  DHHLFSAKYVPFNADPSSSTTESYSLDEIVYRSQSGGLLDVQHDMDALKRFDGEYWRNLF 129

Query: 282 NSR 290
           +SR
Sbjct: 130 DSR 132


>sp|Q9MT28.1|THRC_SOLTU RecName: Full=Threonine synthase, chloroplastic; Short=TS; Flags:
           Precursor gi|8439547|gb|AAF74984.1|AF082894_1 threonine
           synthase [Solanum tuberosum]
          Length = 519

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 12/60 (20%)
 Frame = +3

Query: 147 NHAFSARFVPFNADPSCNQSYSLD------------DIKYNIEALKKFDAQYWKTLFNSR 290
           +H FSAR+VPFNA P+ ++ YSLD            D++++++ALKKFD QYW++LF+SR
Sbjct: 69  SHNFSARYVPFNAGPNSDEWYSLDEIVYRSRSGGLLDVQHDMDALKKFDGQYWRSLFDSR 128


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